Pseudoduganella flava: GO485_12810
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Entry
GO485_12810 CDS
T06346
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
mfla
Pseudoduganella flava
Brite
KEGG Orthology (KO) [BR:
mfla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfla03016
]
GO485_12810 (thpR)
Enzymes [BR:
mfla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
GO485_12810 (thpR)
Transfer RNA biogenesis [BR:
mfla03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
GO485_12810 (thpR)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QGZ39844
LinkDB
All DBs
Position
3059634..3060167
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AA seq
177 aa
AA seq
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MIANQPDRTPESAVTGTATRKLFFALWPGDAERAALAALQADVKGRLTPPAKLHLTLAFL
GHLPAAGVPALLDIRAALAVPPVRLVFDCYGYFARPRIAWAGMTQVPAELVALHDDLVRR
LGAAGFSAATHGSFKPHVTLAREAKEAPPDAPPAPVVWNVREAVLVESLPDGRYVPF
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgatagcaaatcaaccggaccggacgcccgaaagcgcggtgacaggcactgcgacccgc
aagctgttctttgcattgtggcctggcgatgccgagcgcgcggcgctggccgcgctgcag
gccgatgtgaaaggccgcctgacgccgccggcgaaactgcacctgacgctcgccttcctg
gggcacctgccggccgccggcgtgccggcgctgctggacatccgtgccgcgctggccgtg
ccgcctgtgcggctcgtcttcgattgctacggttatttcgcccggccgcgcatcgcgtgg
gccggcatgacgcaggtgccggccgagctggtggcgctgcacgacgacctggtgcgccgg
ctcggcgcggccggcttttcggccgccacgcatggctcgttcaagccgcacgtgaccttg
gcgcgcgaggcgaaggaagcaccgcccgatgcgccgccagcgcccgtcgtgtggaacgtg
cgcgaagcggtgctggtcgaatcgctgccggacgggaggtatgtgcctttctag
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