Pseudoduganella flava: GO485_13055
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Entry
GO485_13055 CDS
T06346
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
mfla
Pseudoduganella flava
Pathway
mfla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GO485_13055 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfla03019
]
GO485_13055 (pcnB)
Enzymes [BR:
mfla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
GO485_13055 (pcnB)
Messenger RNA biogenesis [BR:
mfla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GO485_13055 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
DUF2204
Motif
Other DBs
NCBI-ProteinID:
QGZ39887
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All DBs
Position
3111387..3112892
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AA seq
501 aa
AA seq
DB search
MIKKFIRKILGVKAPRNTDEPEVLGPEQHGIDPKMVSSNAVRVTSTLQEAGFEAFVVGGA
VRDLLLGVKPKDFDIATNATPEQVKRLFRRAFIIGRRFQIVHVMFGQDLLEVTTFRGTTT
DNAPKDEHGRVLRDNTFGSQAEDAERRDFTINAMYYNPATQQVLDYHGGMRDIRAKTLRI
IGQPEARYREDPVRMLRVVRFAAKLKFDIEPTTAAPISVMAPLINNVPAARVFDEMLKLL
MSGSALACLQQLRKAGLHHGLLPLLDVVLEQPLGFKFVTLALEATDKRIAAGKTVSPGFL
FASLLWHQVLEKWNAYQAAGEFPIPALHLAADEVLESQTEKLALQRKIGSDMRDIWAMQP
RFERRNGKNPYKLLEHLRFRAGFDFLLLRCASGEIDPELGNWWSAFYEADETVRAEMVSA
VSGTGTGTGSKRKRPPRRGTRHGEEAEASTEQGDEGADYEGEEVHADAESSPAPRKRRRG
PRRKRNGEGGAAAPADVPTVD
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgattaagaaattcatccgcaagatcctgggcgtgaaagccccccgcaacaccgacgaa
cccgaggtactggggccggaacaacatggcatcgacccgaagatggtgtcgtccaacgcc
gtccgcgtcacctccacgttgcaggaggcggggttcgaggccttcgtcgtcggcggcgcc
gtgcgcgacctgctgctcggcgtgaagccgaaggatttcgacatcgccaccaacgccacg
ccggaacaggtgaaacgcctgttccgccgcgccttcatcatcggccgccgcttccagatc
gtgcacgtgatgttcggccaggacctgctggaagtgacgacgttccgcggcaccaccacc
gacaacgcgccgaaggatgaacacggccgcgtcctgcgcgacaacacgttcggctcgcag
gccgaagacgcggaacgccgcgacttcacgatcaacgcgatgtactacaacccggccacg
cagcaggtgctggactaccacggcggcatgcgcgacatccgcgcgaaaacgctgcgcatc
atcggccagcccgaggcccgctaccgcgaagacccggtgcgcatgctgcgcgtggtgcgc
ttcgccgcgaagctgaaattcgacatcgaaccgacgacggccgcgccgatctccgtgatg
gcgccgttgatcaacaacgtgcctgccgcgcgtgtgttcgacgagatgctgaaactgctg
atgagcggcagtgcgctggcctgcctgcagcagctgcgcaaggccggcctgcaccacggc
ctgctgccgctgctggacgtcgtgctggaacagccgctgggcttcaagttcgtcacgctg
gcgctggaggccaccgacaagcgcatcgccgccggcaagaccgtgtcgccgggcttcctg
ttcgcgtcgctgctgtggcaccaggtgctggagaagtggaacgcctaccaggccgccggc
gaattcccgatccccgcgctgcacctggccgcggacgaagtcctcgaatcgcagacggag
aagctggcgctgcaacgcaagatcggttcggacatgcgcgacatctgggcgatgcagccc
cgcttcgagcgccgcaacggcaagaacccgtacaagctgctggaacacctgcgcttccgc
gccggcttcgacttcctgctgctgcgctgcgcctccggcgagatcgacccggagctgggc
aactggtggagcgcgttctatgaagccgacgaaacggtgcgcgccgaaatggtgtccgcc
gtttccggcaccggcaccggcaccggcagcaagcgcaagcgcccaccgcgccgcggcacc
cgccatggcgaggaagcggaagcctccaccgagcagggcgacgaaggcgccgactacgaa
ggcgaggaagtgcacgccgacgcggaaagcagcccggcaccgcgcaagcgccgccgcggc
ccgcgccgcaagcgcaacggcgaaggtggtgcggcagccccggccgacgtgccgaccgtc
gactga
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