Pseudoduganella flava: GO485_13355
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Entry
GO485_13355 CDS
T06346
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mfla
Pseudoduganella flava
Pathway
mfla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GO485_13355 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfla03019
]
GO485_13355 (recQ)
03400 DNA repair and recombination proteins [BR:
mfla03400
]
GO485_13355 (recQ)
Enzymes [BR:
mfla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GO485_13355 (recQ)
Messenger RNA biogenesis [BR:
mfla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GO485_13355 (recQ)
DNA repair and recombination proteins [BR:
mfla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GO485_13355 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
QGZ39943
UniProt:
A0A562PWW1
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All DBs
Position
3180983..3182803
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AA seq
606 aa
AA seq
DB search
MDQLDISQRALHLLESVFGYSAFRGQQGQIVEHVANGGDALVLMPTGGGKSLCYQIPALL
RDGVGVVISPLIALMQDQVDALAEVGVRAAFLNSTQTWEETARIERMVRTGQLDLVYVAP
ERLMTQRCFDLLQDSKIALFAIDEAHCVSQWGHDFRPEYIKLSVLHEQFPGVPRIALTAT
ADQQTRAEIAHRLDLTTAAQFVSSFDRPNIRYSIVEKTNGRKQLLDFISGEHTGDSGIVY
CLSRKKVEETADFLNENGIRALPYHAGMEHAKRAANQARFLREENLVMVATIAFGMGIDK
PDVRFVAHLDLPKSIEGYYQETGRAGRDGMPASAWMAYGLQDVVLQRRMIDESEADEDFK
RVLGAKLDAMLGLCETLSCRRVRLLDYFGEPSTPCGNCDTCLVPPVSFDGTVPVQKLLSA
IYRVDQRFAATHVIEVLRGVETERIKTWHHDSLSVFGIGADRSEQEWRAILRQVIALGLV
TVDHDQYSSLKLTDAARPVLKGGQKVQLRQYQKPVKVKRSAAPKGYVEMDLDGEEQAIFE
RLRAWRMGAAREHNVPAYVIFVDATLREIAKAKPTSLDHLRGVSGVGEKKLASYGDEIVR
LITDMT
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggatcaactggacatcagtcaacgcgccctgcacctgctcgaatccgtcttcggctac
tcggcctttcgcggacaacaggggcagatcgtcgaacacgtcgccaatggcggcgacgcg
ctcgtgctgatgcccaccggcggcggcaaatcgctgtgctaccagatcccggcgctgctg
cgcgacggcgtcggcgtcgtcatctcgccgttgatcgccctgatgcaggaccaggtggat
gccctcgccgaagtcggcgtgcgggctgccttcctgaactcgacgcagacgtgggaagaa
acggcgcgcatcgaacgcatggtgcgcacgggccagctggacctcgtctacgtggcaccg
gagcgcctgatgacgcagcgctgcttcgacctgctgcaggattcgaagatcgcactgttc
gcgatcgacgaggcgcactgcgtgtcgcaatggggccacgacttccgccccgagtacatc
aagctgtcggtactgcacgagcagttccccggcgtgccgcgcatcgcgctgaccgccacc
gccgaccagcagacccgcgccgagatcgcgcaccggctggacctgacgacggcagcgcaa
ttcgtgtcgtcgttcgaccgcccgaacatccgctactcgatcgtcgagaagaccaacggc
cgcaagcagctgctggacttcatcagcggcgagcatacgggcgattcgggcatcgtctac
tgcctgtcgcgcaagaaggtcgaggaaacggccgacttcctgaacgagaacggcatccgc
gcgctgccgtaccacgccggcatggagcacgccaagcgcgccgccaaccaggcccgcttc
ctgcgcgaagagaacctcgtgatggtggcgacgatcgcgttcggcatgggcatcgacaag
ccggatgtgcgcttcgtcgcccacctcgacctcccgaaaagcatcgagggctactaccag
gagacaggccgcgccggccgcgacggcatgcccgccagcgcctggatggcctacggcctg
caggacgtggtgctgcagcgccggatgatcgacgaatccgaggccgacgaggacttcaag
cgcgtgctgggcgccaagctcgatgcgatgctgggcctgtgcgagacgctgtcgtgccgg
cgcgtgcggctgctcgactacttcggcgagccgtccacgccgtgcggcaactgcgacacg
tgcctggtcccgcccgtgtcgttcgacggcacggtgcccgtgcagaagctgctgtcggcg
atctaccgcgtcgaccaacgcttcgccgccacccacgtgatcgaggtgctgcgcggtgtc
gagacggagcgcatcaagacgtggcatcacgacagcctgtccgtgttcggcatcggcgcc
gaccgcagcgagcaggaatggcgcgcgatcctgcgccaggtgatcgcgctggggctcgtc
actgtcgatcacgaccagtacagctcattgaagctgacggatgccgcccgccccgtgctg
aaaggcggccagaaggtccagctgcgccagtaccagaagcccgtgaaggtgaagcgcagc
gcggcgccgaaaggctacgtcgaaatggatctcgacggggaagaacaggcgatcttcgag
cgcctgcgcgcgtggcgcatgggcgcggcgcgcgaacacaacgtgccggcgtatgtgatc
ttcgtcgacgcgaccttgcgtgaaatcgccaaggccaagccgacgtcgctcgaccacctg
cgcggcgtctcgggcgtcggcgagaagaagctcgcgtcctacggcgacgagatcgtccgc
ctgatcacggacatgacctga
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