Pseudoduganella flava: GO485_14040
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Entry
GO485_14040 CDS
T06346
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21825
AraC family transcriptional regulator, L-arginine-responsive activator
Organism
mfla
Pseudoduganella flava
Brite
KEGG Orthology (KO) [BR:
mfla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mfla03000
]
GO485_14040
Transcription factors [BR:
mfla03000
]
Prokaryotic type
Helix-turn-helix
AraC family
GO485_14040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_23
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
QGZ40070
UniProt:
A0A562PCN8
LinkDB
All DBs
Position
complement(3335761..3336699)
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AA seq
312 aa
AA seq
DB search
MSFANLARLAREPALRMLLVNAGDAESLTWSGLVQPLRRAQRAHPGFTLDVRTLEAAARE
PGDGWHVALLVADEQQPAPQADLLHAALERCRGAQYWGGVGAAVLWLAEQGLAAGVRIAL
PWALYADTEEIAERAILTPHLFELDGRVLSCCGGAASIDFALTLIEHLLGGGTSAVVKEA
LCIDRVRGAEERQRVALQARFGALQPKLSEAVTLMEANIEEPLSTDDIAQLVGLSRRQLE
RLFKQYLGSLPSRYYLELRLQRARQLLLETNHSIVQVGLMCGFSSGSHFSTAFGALFGNT
PREERQRKLAGA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcgctaacctcgcgcggctggcccgcgaacccgcgctgcgcatgctgctggtg
aacgcgggcgatgccgaaagcctgacctggtccggtcttgtccagccgctgcgccgcgcg
cagcgcgcccaccccggcttcacgctcgacgtgcgcacgctcgaggcggcggcgcgcgag
ccgggcgacggctggcacgtggcgctgctggtcgccgatgagcagcagcccgcgcctcag
gccgacctgctgcacgcggcgctggagcgctgccgcggggcccaatactggggcggcgtc
ggcgcggccgtgctgtggcttgccgagcagggcctggcggccggcgtgcgcatcgcgctg
ccgtgggccctgtatgccgataccgaggaaatcgccgagcgggccatcctgacgccgcac
ctgttcgagctggacggccgggtgctcagctgctgcggcggcgcggccagcatcgacttc
gcgctgacgctgatcgagcacctgctgggcggcggcaccagcgccgtcgtcaaggaagcg
ctgtgcatcgaccgcgtgcgcggcgccgaggaacgccagcgcgtggccttgcaggcccgc
ttcggcgcgctgcagccgaagctgtcggaagcggtcacgctgatggaggcgaacatcgag
gagccgctgtccaccgacgacatcgctcagctggtcggcctgtcgcggcgccagctggag
cgcctgttcaagcaatacctgggcagcctgccgtcgcgctactacctcgaactgcgcctg
cagcgggcgcgccagctgctgctggaaaccaaccattcgatcgtgcaggtagggctgatg
tgcggtttctcgtccggctcccatttctccaccgcattcggcgcgctgttcggcaatacg
ccgcgggaggagcggcagcgcaagctggcgggggcatag
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