Pseudoduganella flava: GO485_14250
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Entry
GO485_14250 CDS
T06346
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mfla
Pseudoduganella flava
Pathway
mfla00061
Fatty acid biosynthesis
mfla00071
Fatty acid degradation
mfla01100
Metabolic pathways
mfla01212
Fatty acid metabolism
mfla02024
Quorum sensing
mfla04146
Peroxisome
Module
mfla_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mfla00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GO485_14250
00071 Fatty acid degradation
GO485_14250
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GO485_14250
09145 Cellular community - prokaryotes
02024 Quorum sensing
GO485_14250
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mfla01004
]
GO485_14250
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mfla04147
]
GO485_14250
Enzymes [BR:
mfla01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GO485_14250
Lipid biosynthesis proteins [BR:
mfla01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GO485_14250
Exosome [BR:
mfla04147
]
Exosomal proteins
Exosomal proteins of breast milk
GO485_14250
Exosomal proteins of breast cancer cells
GO485_14250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QGZ40108
LinkDB
All DBs
Position
complement(3377990..3379660)
Genome browser
AA seq
556 aa
AA seq
DB search
MEKIWLKSYPEGVPAEIDVSQYTSVAHLLEDSFRKYADQNAYVCMDKFLTYAEVDQMSRK
FGAWLQGQGLKPGARVAIMLPNVLQYPVAMAGILRAGYTVVNVNPLYTPRELEHQLKDSG
AEAIVVLENFATTVQQVLHETPVKHVIVATMGDLLGGVKGAIVNLVVRHVKKMVPAFSLP
QAVPFKRVLAEGARMTLTPVKIGHDDIAFLQYTGGTTGVSKGAVLLHRNVIANVLQNEAW
LHMGPQKEQIVFVCALPLYHIYSLTISAFMGMRLGGLNILIPNPRDIPGFVKELAKYRVT
VLPAVNTLYNALLNNPDFAKLDFSSYKVCNGGGMAVQQAVADKWLKLTGTPIIEGYGLSE
TSPVATANRVDIKEFTGTIGLPIPSTEVAILDDDGNEVPLGVAGEIAIRGPQVMAGYWQR
PDETARSMTPNGFFKTGDVGVMDERGYTKIVDRKKDMIIVSGFNVYPNEVEGVVAAHPGV
LECACIGVPDKNSGEAVKLFVVRKDPNLTADELLDFCKHELTAYKKPKYIEFRDELPKTN
VGKILRRQLRDERKVA
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatctggttgaaatcctaccccgaaggcgtacccgccgagatcgacgtctcg
cagtacacctcggtggcgcatctgctggaggattcgttccggaagtacgccgaccagaac
gcgtacgtctgcatggataaattcctcacctatgccgaggtcgaccagatgtcccgcaag
ttcggcgcatggctgcagggccagggcctgaagccgggtgcccgcgtggcgatcatgctg
ccgaacgtgctgcaataccccgtcgcgatggccggcatcctgcgcgccggctacacggtc
gtcaacgtcaatccgctgtacacgccgcgcgagctggagcaccagctgaaggactcgggc
gccgaggcgatcgtcgtgctggagaacttcgcgaccaccgtgcagcaggtgctgcatgaa
actcccgtcaagcacgtgatcgtcgccacgatgggcgacctgctgggcggcgtgaagggc
gcgatcgtcaacctcgtcgtgcgtcacgtgaagaagatggtgccggctttctcgctgccg
caggccgtgccgttcaagcgcgtgctggccgaaggcgcgcgcatgacgctgacgccggtg
aagatcggtcacgacgacatcgcgttcctgcagtacacgggcggcacgacgggcgtatcg
aagggcgccgtgctgctgcaccggaacgtgatcgccaacgtgctgcagaacgaagcgtgg
ctgcacatgggcccgcagaaggaacagatcgtgttcgtctgcgcactgccgctgtaccac
atctattcgctgacgatttccgcgttcatgggcatgcgcctgggcggcctgaacatcctg
attccaaacccgcgtgacattcccggcttcgtcaaggaactggcgaagtaccgcgtgacg
gtgctgccggccgtgaacacgctgtacaacgcgctgttgaacaaccccgacttcgccaag
ctggacttctccagctacaaggtctgcaacggcggcggcatggccgtgcagcaggccgtg
gcggacaagtggctgaaactcacgggcacgccgatcatcgagggctacggcctgtccgag
acgtcgccggtggccaccgcgaaccgcgtcgacatcaaggagttcacgggcacgatcggc
ctgccgatcccgtcgaccgaagtcgccatccttgacgacgacggcaacgaagtgccgctg
ggcgtggccggcgagatcgcgatccgcggcccgcaggtgatggccggctactggcagcgc
ccggacgaaacggccaggtcgatgacgccgaacggcttcttcaagacgggcgacgtcggc
gtgatggacgaacggggctacacgaagatcgtcgaccgcaagaaggacatgatcatcgtc
tcgggcttcaacgtctacccgaacgaggtggaaggcgtcgtcgcggcgcacccgggcgtg
ctcgaatgcgcgtgcatcggcgtgccggacaagaactccggcgaggccgtcaagctgttc
gtcgtgcgcaaggatccgaacctgacggccgacgaactgctggacttctgcaagcatgaa
ctgaccgcgtacaagaagccgaagtacatcgagttccgcgacgagctgccgaagacgaac
gtcggcaagatcctgcggcgccagctgcgcgacgaaaggaaagtcgcctga
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