Pseudoduganella flava: GO485_14515
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Entry
GO485_14515 CDS
T06346
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
mfla
Pseudoduganella flava
Brite
KEGG Orthology (KO) [BR:
mfla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfla03032
]
GO485_14515 (gyrB)
03400 DNA repair and recombination proteins [BR:
mfla03400
]
GO485_14515 (gyrB)
Enzymes [BR:
mfla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GO485_14515 (gyrB)
DNA replication proteins [BR:
mfla03032
]
Prokaryotic type
DNA Topoisomerases
GO485_14515 (gyrB)
DNA repair and recombination proteins [BR:
mfla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GO485_14515 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
Toprim_4
HATPase_c_3
PT-TG
Motif
Other DBs
NCBI-ProteinID:
QGZ40140
LinkDB
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Position
3436639..3439137
Genome browser
AA seq
832 aa
AA seq
DB search
MSESHNEVPAQAKSEEYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSI
DEALAGYCSEIHVTIHSDNSISITDNGRGIPVGLKMDDKHEPKRSAAEIVLTELHAGGKF
DQNSYKVSGGLHGVGVSCVNALSKLLRVTIRRDGKVHQMEFVRGVPQNREIEMRDGVAVS
PIKVIGDTDKRGTDVHFWADEDIFTHVEFHYEILAKRIRELSFLNNGVNIKLSDQRTGKE
EIFAFEGGTRGFVEYINKAKNVLHPTVFQATGERQSDQGTTISVDVSMQWNDAFNEQVLC
FTNNIPQRDGGTHLTGLRAAMTRVINKYIDENEFAKKAKVEISGDDMREGLTCVLSVKVP
EPKFSSQTKDKLVSSEVRGPVEEIVAKTLTDFLMEKPNDAKIICGKIVEAARAREAARKA
RDLTRRKGVMDGLGLSSKLADCQERDPALAELYIVEGDSAGGSAKQGRDRKFQAILPLRG
KVLNVEKARFEKMLSSEQITTLIATLGTSIGPDEFNVEKLRYHRIIIMTDADVDGAHIRT
LLLTLFYRQMPQLVERGHVYIAQPPLYKVKAGRDERYLKDDLEEAGYMMTVALNTAVLTP
REGADPITGEALTELARQYNLANAVMTRLTRVIDRAALTAIMTGVKLDLSTIDAARATAQ
ALSDNVNDAAVTVSVRSDELSEKHMLWIERMHHGNVKVSTIDADFVTSADYAVLSNAAST
FTGLIGEGAFIRRGEGERTKESAVRDFHDAMQWLRDEAERTVTKQRYKGLGEMNPEQLWE
TTMDPTVRRLLKVQIEDAIAADQIFTTLMGDDVEPRRNFIESNALRAGNIDV
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaagccataacgaagtccctgcgcaggccaaatccgaagaatacggcgcttct
tcgatccagatcctggaaggcctggaagctgtccgcaagcgccccggcatgtatatcggt
gacacctcggacggcaccggcctgcaccacctggtgttcgaagtgctggacaactcgatc
gacgaagcgctggccggctactgctccgagatccacgtgacgatccattcggataactcg
atctcgatcaccgacaacggccgcggcatccccgtcggcctgaagatggacgacaagcac
gagccgaagcgctccgctgccgagatcgtgctgacggagctgcacgccggcggcaagttc
gaccagaactcgtacaaggtctccggcggcctgcacggcgtgggcgtctcgtgcgtgaac
gcgctgtcgaaactgctgcgcgtgacgatccgccgcgacggcaaggtccaccagatggaa
ttcgtgcgcggcgtgccgcagaaccgcgaaatcgaaatgcgcgacggcgtggccgtctcg
ccgatcaaggtcatcggcgacaccgacaagcgcggcaccgacgtgcacttctgggccgac
gaagacatcttcacgcacgtggaattccactacgagatcctggccaagcgcatccgcgaa
ctctcgttcctgaacaacggcgtcaacatcaagctctccgaccagcgcaccggcaaggaa
gagatcttcgcgttcgaaggcggcacgcgcggcttcgtcgagtacatcaacaaggccaag
aacgtgctgcacccgaccgtgttccaggcgaccggcgaacgccagtcggaccagggcacg
acgatctcggtggacgtgtcgatgcagtggaacgacgccttcaacgaacaggtactctgc
ttcacgaacaacatcccgcaacgcgacggcggcacccacctgacgggcctgcgcgccgcg
atgacgcgggtgatcaacaagtacatcgacgagaacgaattcgccaagaaggccaaggtg
gaaatctccggcgacgacatgcgcgaaggcctgacctgcgtgctgtccgtgaaggtgccg
gaaccgaagttctcgtcgcagacgaaagataaactggtgtcgtccgaagtgcgcggcccg
gtggaagagatcgtggcgaagacgctgacggacttcctgatggaaaagccgaacgacgcg
aagatcatctgcggcaagatcgtcgaagcggcacgtgcccgcgaagcggcccgcaaggcg
cgcgacctgacccgccgcaagggcgtgatggatggcctgggcctgtcgtcgaaactggcc
gactgccaggaacgcgacccggcgctggccgaactgtacatcgtcgagggtgactccgca
ggcggctcggccaagcaaggccgcgaccgcaagttccaggcgatcctgccgctgcgcggt
aaggtgctgaacgtggagaaggcacgcttcgagaagatgctgtcctccgagcagatcacg
accttgatcgcaacgctcggcacatcgatcggcccggacgaattcaacgtcgaaaaactg
cgctaccaccgcatcatcatcatgaccgacgcggacgtcgacggtgcccacatccgcacg
ctgctgctgacgctgttctatcgccagatgccgcaactggtcgaacgcggccacgtgtac
atcgcccagccgccgctgtacaaggtcaaggccggccgcgacgagcgctacctgaaggac
gacctggaagaagcgggctacatgatgacggtggcactgaacaccgccgtgctgacgccg
cgcgaaggcgccgacccgatcaccggcgaagcgctgacggaactggcccgccagtacaat
ctggcgaacgccgtcatgacgcgcctgacgcgcgtgatcgaccgtgccgcgctgaccgcg
atcatgacgggcgtgaagctggacctgtccacgatcgacgcggcccgcgccaccgcgcag
gccctgtcggacaatgtgaacgacgctgcggtgacggtgtccgtccgttcggacgagctg
tcggaaaagcacatgctgtggatcgagcgcatgcatcacggtaacgtgaaggtgtcgaca
atcgacgccgacttcgtcaccagcgccgactacgccgtgctgtccaacgccgcatcgacg
ttcacgggcttgatcggcgaaggagccttcatccgccgcggcgaaggcgagcgcacgaag
gaatccgccgtacgcgacttccacgacgcgatgcaatggctgcgcgacgaagccgagcgc
accgtcacgaagcagcgctacaaaggtctgggcgagatgaatcccgagcagctgtgggaa
acgacgatggacccgaccgtgcgccgcctgctgaaggtgcagatcgaggacgccatcgcg
gcggatcagatcttcacgacgctgatgggcgacgacgtggaaccgcggcggaacttcatc
gagtcgaatgcgctgcgggcggggaatatcgacgtgtaa
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