Pseudoduganella flava: GO485_15540
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Entry
GO485_15540 CDS
T06346
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mfla
Pseudoduganella flava
Pathway
mfla03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mfla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GO485_15540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfla03400
]
GO485_15540
Enzymes [BR:
mfla01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
GO485_15540
DNA repair and recombination proteins [BR:
mfla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GO485_15540
Prokaryotic type
GO485_15540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
QGZ40325
LinkDB
All DBs
Position
complement(3678115..3678789)
Genome browser
AA seq
224 aa
AA seq
DB search
MNFRKTVRIEPTWKEHLQPEFDKLYWAELTSFVRAEYQAGQCCPPGKHIFRAFDLTPFDK
VKVVILGQDPYHTPGAAMGFCFSVPDGNRPQPSLQNIFQELESDLGVKRTHTDLSDWAEQ
GVFLLNAVLTVRAREAGSHAGKGWENFTDTAISLLSQRREHVVFILWGSYAIAKRALIDA
RKHLVITSPHPSPFSAHKGFFGSRPFSRANEYLRATGQEPIVWG
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgaactttagaaagaccgtacgcatcgaacccacctggaaggaacacctgcagcccgag
ttcgacaagctatactgggccgaactcaccagcttcgtccgtgccgaataccaggccggc
cagtgctgcccgccgggcaagcacatcttccgcgccttcgacctgacgccgttcgacaag
gtcaaggtcgtcatcctcggccaagacccgtaccacacgcccggcgcggcgatggggttc
tgtttttctgtcccggacggcaatcgcccacaacccagtttgcagaacatcttccaggag
ctcgaaagcgacctcggcgtgaagcgcacgcacaccgacctgtccgactgggccgagcag
ggcgtgttcctgctcaatgccgtgctgacggtgcgcgcccgcgaagccggttcgcatgcg
ggaaagggttgggagaacttcacggacacggcgatcagcctgctgtcgcagcgccgcgag
cacgtcgtgttcatcctatggggaagctacgcgatcgccaagcgggcgttgatcgacgcc
cgcaaacacctcgtgatcacgtcgccgcacccgtcgccgttctcggcgcacaaggggttc
ttcggcagcaggccgttttcgcgggcgaacgagtatttgcgggcgacggggcaggagccg
atcgtgtgggggtga
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