Pseudoduganella flava: GO485_17140
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Entry
GO485_17140 CDS
T06346
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mfla
Pseudoduganella flava
Pathway
mfla03420
Nucleotide excision repair
mfla03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mfla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GO485_17140
03430 Mismatch repair
GO485_17140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfla03400
]
GO485_17140
Enzymes [BR:
mfla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GO485_17140
DNA repair and recombination proteins [BR:
mfla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GO485_17140
MMR (mismatch excision repair)
Other MMR factors
GO485_17140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
QGZ40613
LinkDB
All DBs
Position
4017765..4019783
Genome browser
AA seq
672 aa
AA seq
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MAHEPSKEQAEIIQSRANVILIDAVAGAGKTTTLCMTGIEACRRGLAPAAVTCLAFSDGA
KKRFVEKLAEEGAPSGIAPLTIAEFALRHLRKLDTTGLFALPPLLGPAQVRDRLTEAAAA
VWQRYEANGTQSDFDFGIEQSPDRIDHLFQVLRLLKATLSTHRFGDDDFASVQRFEMADE
LDLPVELIDICAAYERLREPEPGEFNWQTADDFVPDLVRVLDLNQGAAQQLWAPALYLID
EWHDVNAAEFALVRLLKRRARLIVVGDRDQVIDAARGAALRFSTDLFSATYPEAARLPLR
RSRRFGAALARAASRLTSRPVEALDGLHTVQHKLAYDPGVPMGCARAVAAHVKSLHGAHH
DVKLSDIAIVTREDDQSIDLENALIDANIPYRCEGIESYLLRPEILFMRALLHIVSGCYD
TLDKDKPTVRAMVGALAAFVSMPGDAAQFDSSYLQVSRTARHDPLEQAIETVAATPASLH
WFFDGIVCKPHDADTIITRNWKAKFAACVATLAERKETLATAADVLQAVRGMIDLKAAVG
RAVPRRSEADAALRSIAHFAEFAAAYGNKPVEQFLQELRGRQRKLSARTDANRARAQLVL
TTVRTAKGQEWNHVIVPYLQHGEFPRSADLAEERRFLYVAMTRAQESLTLCQPDEAHRRM
WSPLLHGAEARA
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacgaacccagcaaggaacaggccgaaatcatccaatcccgcgcgaacgtcatc
ctgatcgatgcggtcgcgggtgcgggcaagaccacgacgttgtgcatgaccggcatcgag
gcatgccggcgtggcctggcgccggccgccgtcacgtgcctggcgttctcggacggagcg
aagaagcgcttcgtcgagaagctggccgaggagggcgcgccatccggcatcgcgccattg
acgatcgccgagttcgcgctgcgccacctgcgcaagctcgacaccaccggactgttcgcg
ctgccgccgctgctcggccccgcgcaggtgcgcgaccggctcacggaagcggcggcagcg
gtctggcagcgttacgaagcgaacggcacgcagtccgacttcgacttcggcatcgagcaa
agcccggaccgcatcgaccacctgttccaggtactgcgcctgttgaaggcaacactgtcc
acgcaccgcttcggcgacgacgacttcgcctcggtgcagcgcttcgagatggcggacgag
ctggacctgccagtcgaactgatcgacatctgcgcggcatacgaacggctgcgcgaaccg
gagccgggcgaattcaactggcaaacggcggacgacttcgtgcccgacctcgtgcgcgtg
ctggacctgaatcagggcgccgcccagcagctgtgggcaccggcgctgtacctgatcgac
gaatggcatgacgtgaatgctgccgagttcgcgctggtgcgcctgctgaagcggcgcgcg
cgcctcatcgtcgtgggcgaccgcgaccaggtcatcgatgccgcgcgcggtgccgcgctg
cgcttttccaccgacctgttttcggccacgtatccggaagcggcacggctgccgctgcgc
cgctcgcgccgcttcggcgccgcgctggcacgtgccgcatcacggctcacatcccgtccc
gtcgaagcgctcgacggcctgcacacggtgcagcacaagctggcgtacgacccgggtgtg
ccgatgggatgcgcgcgcgccgtcgcggcccacgtgaagtcgctgcatggcgcgcaccat
gacgtgaagctgtccgacatcgcgatcgtcacgcgcgaggacgaccagagcatcgacctc
gaaaacgcactgatcgatgcgaacatcccgtaccgctgcgagggcatcgagtcgtatctg
ctgcgtcccgagatactgttcatgcgcgcgctgctgcacatcgtcagcggttgctacgac
acgctggacaaggacaagccgaccgtgcgcgcgatggtcggtgcgctggcggcgttcgtg
tcgatgccgggcgatgcggcacaattcgacagcagctacctgcaggtcagccgtaccgcc
cgccacgatccgctggagcaggcgatcgagacggtggcggccacgccggcatcgctgcac
tggttcttcgacggaatcgtctgcaagccgcacgatgcggacacgatcatcacgcgcaac
tggaaagcgaagttcgccgcgtgcgtggccacgctggccgagcgcaaggagaccctcgcc
accgcggccgacgtgctgcaggccgtgcggggaatgatcgacctgaaggcggccgtcggc
cgcgcggtgccgcggcgcagcgaggccgatgcggcgctgcgctcgatcgcccacttcgcc
gagttcgcagcggcctatgggaacaagccggtcgagcaattcctgcaggagctgcgcggc
cgccagcgcaagctgtctgcccgcaccgatgcgaatcgcgcacgtgcgcagctcgtgctg
acgaccgtgcgaacggcgaaggggcaggagtggaaccacgtgatcgtgccttacctgcag
cacggcgaattcccgcgcagcgccgacctggccgaggagcgccgcttcctgtacgtggcg
atgacgcgggcgcaggaaagcctgacgttgtgccagccggacgaggcgcaccggcggatg
tggagtccgctgttgcatggggcggaagcgcgggcctga
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