Pseudoduganella flava: GO485_17630
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Entry
GO485_17630 CDS
T06346
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
mfla
Pseudoduganella flava
Pathway
mfla00300
Lysine biosynthesis
mfla00470
D-Amino acid metabolism
mfla01100
Metabolic pathways
mfla01110
Biosynthesis of secondary metabolites
mfla01120
Microbial metabolism in diverse environments
mfla01230
Biosynthesis of amino acids
Module
mfla_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mfla00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GO485_17630 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GO485_17630 (dapF)
Enzymes [BR:
mfla01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
GO485_17630 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
PmbA_TldD_2nd
RhaB_D2
Motif
Other DBs
NCBI-ProteinID:
QGZ40704
UniProt:
A0A562PMX7
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Position
complement(4114043..4114906)
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AA seq
287 aa
AA seq
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MKLKFTKMHGAGNDFVVIDAINQQIDFTPTQWKALADRRFGVGADQLLVVEKSTNPSCDF
RYRIFNSDGGEVEQCGNGARAFVKFVAEKGLTDRRSISVETMSGVIAPRLEDDGSVTVDM
GAPVFEPARVPFDTEGLQGQPEGNDTLWPLVLELAGQKETVLVSVLSMGNPHAVQVVADV
DAAPVELTGPLIEHHTHFPKRVNAGFMQLVNRHHVRLRVFERGAGETLACGTGACAAAVA
GIRRGLLDSPVRVDARGGQLSIAWAGEGEPVYLTGPAVTVFEGEITV
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaaattcaccaagatgcatggcgccggcaacgacttcgtcgtgatcgacgcc
atcaaccagcagatcgatttcacccctacccagtggaaggcgctggcggaccgccgcttc
ggcgtcggcgccgaccagttgctcgtcgtcgagaaatcgaccaacccgagctgcgacttc
cgctaccgcatcttcaacagcgacggcggtgaagtggaacagtgcggcaacggcgcgcgg
gcgtttgtcaagttcgtggccgagaagggcttgacggaccggcgcagcatctcagtcgaa
acgatgtccggcgtcatcgcgccgcgcctggaagacgacggtagcgtcaccgtcgacatg
ggcgctcccgtgttcgaaccggcgcgcgtgcccttcgacaccgagggcctgcagggccag
ccggaaggcaacgatacgctgtggccgctcgtgctggaattggccgggcaaaaggagacc
gtgctcgtgtcggtgctgtcgatgggcaatccgcatgcggtgcaggtcgtcgccgacgtc
gacgcggcgcccgtcgagctgaccggcccgctgatcgagcaccacacgcacttcccgaag
cgcgtcaacgcgggcttcatgcagctggtgaaccgccatcacgtccgcctgcgtgtattc
gaacgcggcgccggcgaaacgctggcatgcggcaccggtgcctgcgcggcggcggtggcg
ggcatccgccgcggcctgctcgattcgcccgtgcgcgtggacgcgcgcggcggccagctg
tcgatcgcgtgggccggcgaaggcgaaccggtctacctgaccggtccggccgtcaccgtg
ttcgaaggcgaaatcacggtctga
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