Pseudoduganella flava: GO485_17775
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Entry
GO485_17775 CDS
T06346
Name
(GenBank) cyclodehydratase
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
mfla
Pseudoduganella flava
Brite
KEGG Orthology (KO) [BR:
mfla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mfla03009
]
GO485_17775
Ribosome biogenesis [BR:
mfla03009
]
Prokaryotic type
ribosomal protein modification factors
GO485_17775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
Motif
Other DBs
NCBI-ProteinID:
QGZ40732
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Position
4150681..4152576
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AA seq
631 aa
AA seq
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MMTQPTHAPAGGRAGNVFIFSAHDGVRSRLADAAGGQGAAVHAWSDADDRAAFAQMHGAA
ARGVGIVAVERYLLFFPVGGGVQACARCLRQARLAQKIPHELAAHRRGSQIDECAPAHLS
PFALDLVPALMAFVIERADSGIALDLVALTTVPFGLHGQRSCELCNPPPAADTQAAPRLE
HRYKRHAGAYRCRQLGDFAIDVGRYIHPVNGMLGKQLLQNRELPFYALSNGRFFESELAR
EAPIDWFGTAQTYRDSAVVGIIEGLERHAGLLARDRAPAVRASYAQIAGETLHPASLGLY
EDHIYDSDPSLRRFTPETEFTWVRGHSIARGGPVLVPSDFVYYGGRQMIYGNSSGCATGS
CVEEALLFGLLETIERDAFMLHWLARLAPRHIALDTVEDLECRTIIARLTAAGAQLHLLD
ARLDLPIPVVLAVIVREPGQYGTFSIAAGASFDPGEAIRRALGEVAVHFHGFEERSRRAA
AERWGDGGPDFASVTGLEDHALLYGQPQVLHHALFLVENGEERSFGDTYAAWNAVRPRSL
SLLDDLEFFFAALREAGHGDVVWVDQSSPEQMRVGLRTVRAIVPGMLPIDFGHGRCRAAT
LPRLYELPQRLGLRADRLQPADLHRAPHPFP
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgatgacccagcctacccacgcgccggccggcggccgcgccggcaacgtgttcatcttc
tccgcgcatgacggcgtgcgcagccggctggccgatgccgcgggcggacagggcgccgcc
gtgcacgcctggtccgatgcggacgacagggctgcctttgcgcaaatgcacggggctgcc
gcacgcggcgtcggcatcgtcgcggtggagcgctacctgctgttcttcccggtcggcggc
ggcgtacaggcctgcgcgcgctgcctgcgccaggcgcggctggcgcagaagatcccccat
gagctggcggcgcaccggcgcggcagccagatcgacgaatgcgcacccgcccacctgtcg
ccgttcgcgctggacctggtgcccgcgttgatggcgttcgtcatcgaacgcgccgacagc
ggcatcgcgctggacctggtggcgctgaccaccgtgccgttcggcctgcacggccagcgc
agctgcgagctgtgcaacccgccgcccgcggcggacacacaggcggcaccgcgcctggag
caccgctacaaacgccacgccggcgcgtatcgctgccgccagctgggcgacttcgcgatc
gacgtcggccgctacatccaccccgtcaacggcatgctcggcaagcagctgctgcagaac
cgcgagctgccgttctatgcgctgtcgaacggccgcttcttcgaatcggagctggcgcgc
gaggcgccgatcgactggttcggcacggcccagacctaccgcgacagcgcggtggtcggc
atcatcgagggcctggagcggcatgccggcttgctggcgcgcgaccgcgcacccgccgtg
cgggccagctacgcgcagatcgccggcgaaacgctgcatccggccagcctgggcctgtat
gaagaccacatctacgacagcgatccatcgctgcgccgctttacgccggagacggaattc
acgtgggtgcgcgggcattcgatcgcgcgcggcgggccggtgctggtgccgtccgacttc
gtgtactacggcggacgccagatgatctacgggaattcgagcggctgcgcgacgggcagc
tgcgtcgaggaagccctgctgttcggcctgctcgagacgatcgagcgcgacgcgttcatg
ctgcactggctggcccggctggcgccgcgccacatcgccctcgacaccgtcgaggacctg
gagtgccgcacgatcatcgcccgcctgactgccgcgggcgcgcaactgcatctgctcgat
gcgcggctggacctgccgattcccgtcgtgctggccgtgatcgtgcgtgaacccggccag
tacggcacgttctcgatcgccgccggcgccagtttcgatcccggcgaggcgatccgccgc
gcgctgggcgaagtggccgtgcatttccacggcttcgaggaacgctcgcggcgcgcggcg
gccgagcgctggggcgacggcggacctgacttcgccagcgtcacgggcctggaagaccat
gcgctgctgtatggccagccgcaggtgctgcaccatgcgctgttcctcgtcgagaatggg
gaggagcgcagcttcggcgacacgtatgcggcctggaatgcggtacgcccgaggtcgctg
tcgctgctcgacgacctggaattcttctttgccgcgctgcgcgaggccggccacggcgac
gtcgtgtgggtcgaccagagctcgcccgaacagatgcgcgtgggcctgcgcacggtgcgc
gccatcgtgccgggcatgctgccgatcgatttcggccacggccgctgccgcgccgccacg
ttgccgcggctgtacgaactgccgcagcggctcggcctgcgcgcggatcggctgcagccg
gccgacctgcatcgcgccccccatcctttcccctga
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