Pseudoduganella flava: GO485_18485
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Entry
GO485_18485 CDS
T06346
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mfla
Pseudoduganella flava
Pathway
mfla03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mfla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GO485_18485 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfla03400
]
GO485_18485 (mutM)
Enzymes [BR:
mfla01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GO485_18485 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GO485_18485 (mutM)
DNA repair and recombination proteins [BR:
mfla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GO485_18485 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
QGZ40859
LinkDB
All DBs
Position
complement(4314589..4315422)
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AA seq
277 aa
AA seq
DB search
MPELPEVEVTRRGVAPHIEGRAVRDVVLRRAGLRWPFPASLPEILADRTVQATGRRGKYL
LVEFAHGTLIIHLGMSGHLRVLPPGVPAQKHDHFDLVVEGKEGRQVLRLTDPRRFGAVLW
HPQEEGELDTHLLLRGLGVEPLGPEFTGELLYRKTRGRSVAVKAALLAGDIVVGVGNIYC
SESLFRAGINPKTPAGRIGRARYDKLAQAIRDVLAEAIVQGGSTLRDFIGVNGQSGYFQQ
SYFVYDRAGLPCRICAAPVRQIKQGQRSTFYCVNCQR
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccggaagtcgaagtcacccggcgcggcgtcgcgccccatatcgaaggc
cgcgcggtgcgcgacgtggtgctgcgccgcgccggtctgcgctggccgttcccggccagc
ctgcccgagatcctcgcggaccgcacggtgcaggcgacgggccggcgcggcaagtacctg
ctggtcgaattcgcgcatggcacgctgatcatccacctcggcatgagcggccacctgcgc
gtgctgccgcccggcgtgcccgcgcagaagcacgaccacttcgacctcgtcgtcgaaggg
aaggaaggcaggcaggtgctgcggctgacggacccgcgccgcttcggcgccgtgctgtgg
catccgcaggaggaaggcgaactcgatacgcacctgctgttgcgcggcctgggcgtggag
cccctcggcccggagtttaccggcgaactgctgtaccggaagacgcgcggccgctcggtg
gccgtgaaggccgcgctgctggcgggcgacatcgtcgtcggcgtcggcaatatctactgt
tccgaaagcctgttccgcgccgggatcaacccgaagacgccggccggccgcatcggccgc
gcgcgctacgacaagctggcgcaggcgatccgcgacgtgctggccgaggccatcgtccag
ggcggcagcacgctgcgcgacttcatcggcgtgaacggccagtccggctacttccagcag
tcgtatttcgtgtacgaccgcgcgggcctgccgtgccgcatctgcgcggcgcctgtccgc
cagatcaagcaggggcagcgttcgacgttctactgcgtcaattgccaacggtga
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