Pseudoduganella flava: GO485_20440
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Entry
GO485_20440 CDS
T06346
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
mfla
Pseudoduganella flava
Pathway
mfla00730
Thiamine metabolism
mfla01100
Metabolic pathways
mfla01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
mfla00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
GO485_20440 (thiC)
Enzymes [BR:
mfla01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
GO485_20440 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QGZ41191
LinkDB
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Position
4765064..4766944
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AA seq
626 aa
AA seq
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MNAPQKFLASTAEVDSAAIAPLPNSRKIYVTGSRSDIRVPMREITQADTSASFGHEPNPP
VTVYDTSGPYTDPTTTIDIRAGLAPLRAGWIAERDDTEELPGPTSDYGKARLADASLDAL
RFNLHRNPRCAKAGGCVTQMHYARRGIVTPEMEFVAIRENLRRREYVAALQAAGPTGAKM
AEVLGRQHRGASFGASIPEEITPEFVRDEIARGRAIIPANINHPELEPMIIGRNFLVKVN
ANIGNSAVTSSIGEEVEKMTWAIRWGGDTVMDLSTGKHIHETREWIVRNSPVPIGTVPIY
QALEKVNGKAEDLTWEIFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTANRLTGIVSRGGS
IMAKWCLAHHQENFLYTHFEDICQIMKAYDVSFSLGDGLRPGSIYDANDDAQLGELKTLG
ELTQIAWKHDVQVMIEGPGHVPMQLIKENMDLQLEQCSEAPFYTLGPLTTDIAPGYDHIT
SGIGAAQIGWYGTAMLCYVTPKEHLGLPDKDDVKEGIITYKIAAHAADLAKGHPGAQIRD
NALSKARFEFRWEDQFNLGLDPDRARAFHDETLPKESSKVAHFCSMCGPHFCSMKITQEV
REYAASGMQEKAVEFVKQGSQLYSKA
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaccacagaaattcctcgccagcacggccgaggtcgacagcgccgcgatcgcg
ccgctgcccaactcccgcaagatctacgtgaccggcagtcggtccgacatccgcgtgccg
atgcgtgaaatcacgcaggccgatacgtccgcgtcgttcggccacgagcccaatcctcct
gtcaccgtgtacgacacgtccggtccctataccgatccgacgacgaccatcgacatccgc
gccggcctcgcgccgctgcgcgccggctggatcgccgagcgggacgacacggaggagctg
cccggcccgacgtccgattacggcaaggcgcggctcgccgatgcgtcgctggatgcgctg
cgcttcaacctgcaccgcaacccgcgctgcgcgaaggcgggcggttgcgtgacgcagatg
cattacgcgcggcgcggcatcgtcacgcccgagatggagttcgtcgcgatccgcgagaac
ctgcgccggcgcgaatatgtcgcggcgctgcaggcggccggcccgacgggggcgaagatg
gcggaggtgctgggccggcagcatcggggcgcatcgttcggcgcttccattccggaggag
atcacgccggaattcgtgcgcgacgagatcgcccgcggccgcgcgatcatcccggccaac
atcaaccacccggaactggagccgatgatcatcggccgcaacttcctcgtgaaggtcaat
gcgaacatcggcaactcggccgtcacgtcgtcgatcggcgaggaagtcgagaagatgacg
tgggcgatccgctggggcggcgacacggtgatggatctgtcgacgggcaagcatatccac
gagacgcgcgaatggatcgtgcggaacagccccgtgccgatcggcaccgtgccgatctac
caggcgctggagaaggtgaacggcaaggccgaagacctgacgtgggagatcttccgcgac
acgctgatcgaacaggcggagcagggcgtcgactacttcacgatccacgccggcgtgctg
ctgcgctacgtgccgctgacggcgaaccggctgacgggcatcgtctcgcgcggcggctcg
atcatggccaagtggtgcctggcgcatcaccaggagaacttcctgtacacgcacttcgaa
gacatctgccagatcatgaaggcctacgacgtgtcgttcagcctgggcgacggcctgcgg
cccggatcgatctacgacgccaacgatgacgcccagctgggcgaactgaagacgctcggc
gagctgacgcagatcgcctggaagcacgacgtgcaggtgatgatcgaagggcccggccac
gtgccgatgcagctcatcaaggagaacatggacctgcagctggagcagtgcagcgaggcg
ccgttctacacgttggggcccctgacgacggacatcgcgccgggctacgaccacatcacg
tccggcatcggcgccgcgcagatcggctggtacggcaccgcgatgctgtgctacgtgacg
ccgaaggagcacctgggcctgccggacaaggacgacgtcaaggaaggcatcatcacgtac
aagatcgcggcccacgccgccgacctggccaagggccacccgggcgcgcagatccgcgac
aacgcgctgtcgaaggcccgcttcgaattccgctgggaagaccagttcaacctgggcctc
gacccggaccgcgcccgcgccttccacgacgagacgctgccgaaggaatcgtcgaaggtc
gcccacttctgctcgatgtgcggcccgcacttctgctcgatgaagatcacgcaggaagta
cgcgaatacgccgcctccggcatgcaggaaaaggccgtcgaattcgtcaaacagggcagc
cagctgtacagcaaagcgtag
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