Pseudoduganella flava: GO485_20485
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Entry
GO485_20485 CDS
T06346
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mfla
Pseudoduganella flava
Pathway
mfla03420
Nucleotide excision repair
mfla03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mfla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GO485_20485
03430 Mismatch repair
GO485_20485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfla03400
]
GO485_20485
Enzymes [BR:
mfla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GO485_20485
DNA repair and recombination proteins [BR:
mfla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GO485_20485
MMR (mismatch excision repair)
Other MMR factors
GO485_20485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
DUF6525
Motif
Other DBs
NCBI-ProteinID:
QGZ41200
UniProt:
A0A562Q360
LinkDB
All DBs
Position
complement(4775136..4777442)
Genome browser
AA seq
768 aa
AA seq
DB search
MQNLLHNLNPEQLAAVTLPPQNALILAGAGSGKTRVLTTRIAWLIQTGQVSPAGILAVTF
TNKAAKEMLTRLSAMLPINTRGMWIGTFHGLCNRLLRTHYRDAALPQSFQILDTQDQLSM
IKRLLKAHNVDDEKYPPKTVMYFINNNKEQGLRASKVEAYDATERKLVELYDLYDEQCQR
EGVVDFAELLLRTYELLLRNQPLREHYQQRFRHILVDEFQDTNNLQYAWLKLISGHGTQR
GGALFAVGDDDQSIYAFRGANVGNMAAFEAEFQVKNLIKLEQNYRSHGHILDAANMLIAN
NSRRLGKNLRTDAGHGEPVRVYEATSDLQEAQWIIEEAKNLIGEGARRSEIAVLYRSNAQ
SRVIEHALFSAGIPYTVYGGLRYFQRAEVKHAIAYLQLMDNPHNDSAFLRVVNFPARGIG
ARTLEQLQNAAETYGISLYAAVPYMVGKAGTSLGAFVKLVESVRFETQQMALPELVRITL
ESSGLLQHYQNEKEGADRIENLEQMVNAATQFVSEEGYGPGAPAHLGPQADAQAGAAIIN
ADGVEIMDADAPLATVMSPLSAFLAHASLEAGDNQAQAGQDAMQLMTVHSAKGLEFDNVF
ITGLEEGLFPHESSSKEEGGVEEERRLMYVAITRARKRLYMCFCQTRMLHGQTRYNMKSR
FFDELPEESLKWLSPRVQSHWFANKKAAWEDVQLAGGTDNAIAQRLTQKSGNGSGWRIGE
SVAHAKFGEGVIVNLEGSGANCRAQINFGTAGMKVLDLSVAKLERLGR
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacctcctccacaatctcaatcccgaacaactcgccgccgttaccctgccgccg
caaaacgccctgatcctggcgggcgccggctcgggcaagacgcgcgtgctgaccacgcgc
atcgcgtggctgatccagaccgggcaggtgtcgccggccggcatacttgcggtcacgttc
acgaacaaggccgcgaaggagatgctgacgcgcctgtcggcaatgttgccgatcaataca
cgcggcatgtggatcggcacgttccacggcctgtgcaaccggctgctgcgcacgcattac
cgcgacgccgcgctgccgcaatcgttccagatcctcgacacgcaggaccagctgtcgatg
atcaagcgcctgctgaaggcgcacaacgtggacgacgagaagtacccgccgaagacggtg
atgtacttcatcaacaacaacaaggagcaggggctgcgcgcatcgaaggtcgaggcgtat
gacgcgaccgagcgcaagctcgtcgagctgtacgacctgtacgacgagcagtgccagcgc
gaaggcgtcgtcgatttcgccgagctgctgctgcgcacgtacgagctgctgctgcgcaac
cagccgctgcgcgagcactaccagcagcgcttccgccacatcctcgtcgacgagttccag
gataccaacaacctgcaatacgcctggctgaagctgatctccggccacggcacgcagcgc
ggcggcgcgctgttcgccgtcggcgacgacgaccagagcatctacgcgttccgcggcgcg
aacgtgggcaatatggccgcgttcgaagcggagttccaggtgaagaacctgatcaagctg
gagcagaactaccgctcgcacggccacatcctcgatgcggccaatatgctgatcgcgaac
aacagccgccgcctgggcaagaacctgcgcacggatgccggccacggcgagccggtgcgc
gtgtacgaggccacgtccgacctgcaggaagcgcagtggatcatcgaggaggcgaaaaac
ctgatcggcgagggcgcacggcgcagcgagatcgccgtgctgtaccgatcgaacgcgcaa
tcgcgtgtgatcgaacatgcattgttctcggccggcattccatacaccgtgtacggcggc
ctgcgctacttccagcgcgccgaggtgaagcacgccatcgcctacctgcagctgatggac
aacccgcacaacgactcggccttcctgcgcgtggtgaacttcccagcacgcggcatcggc
gcgcgcacgctggagcagttgcagaacgcggccgaaacgtacggcatctcgctgtacgcc
gccgtgccgtacatggtcggcaaggccggcacgtcgctgggcgcattcgtcaagctggtc
gagagcgtgcggtttgaaacgcagcagatggccctgcccgagctggtacgcatcacgctg
gagtcgtccggcctgttgcagcactaccagaacgagaaggaaggcgccgaccgcatcgaa
aacctggagcagatggtcaacgcggccacccagttcgtgtccgaggaaggctacggccct
ggcgcgccggcccacctgggtccgcaggcggacgcgcaggccggtgccgccatcatcaat
gccgacggcgtggaaatcatggatgcggatgcgccgctggcgaccgtgatgtcgccgctg
tccgccttcctcgcgcacgcttcgctggaagcgggcgacaaccaggcgcaggccggccag
gatgcgatgcagctgatgacggtgcactcggcgaagggcctggaattcgacaacgtgttc
atcacgggcctcgaggaagggttgttcccgcacgagagcagctcgaaggaagaaggcggc
gtcgaggaagagcggcgcctgatgtacgtggcgatcacgcgtgcgcgcaagcgcctgtac
atgtgcttctgccagacgcgcatgctgcacggccagacgcgctacaacatgaagtcgcgc
ttcttcgacgagctgccggaggaatcgctgaagtggctgtcgccgcgcgtgcagtcgcac
tggttcgccaacaagaaggcggcctgggaagacgtacagctggctggcggcacggacaac
gcgatcgcccagcgcctcacgcaaaagtccggcaacggctccggctggcgcatcggcgaa
tcggtggcgcatgcgaagttcggcgagggcgtcatcgtcaacctggaaggcagcggcgcg
aactgccgggcgcagatcaacttcggcaccgcgggcatgaaggtgctcgacttgtcggtg
gcgaagctggagcggctgggccgctga
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