KEGG   Pseudoduganella flava: GO485_20505
Entry
GO485_20505       CDS       T06346                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
mfla  Pseudoduganella flava
Pathway
mfla03030  DNA replication
mfla03410  Base excision repair
mfla03420  Nucleotide excision repair
mfla03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mfla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GO485_20505 (polA)
   03410 Base excision repair
    GO485_20505 (polA)
   03420 Nucleotide excision repair
    GO485_20505 (polA)
   03440 Homologous recombination
    GO485_20505 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mfla03032]
    GO485_20505 (polA)
   03400 DNA repair and recombination proteins [BR:mfla03400]
    GO485_20505 (polA)
Enzymes [BR:mfla01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     GO485_20505 (polA)
DNA replication proteins [BR:mfla03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     GO485_20505 (polA)
DNA repair and recombination proteins [BR:mfla03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     GO485_20505 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     GO485_20505 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: QGZ41203
UniProt: A0A562Q539
LinkDB
Position
4779888..4782638
AA seq 916 aa
MQKTLLLVDGSSYLYRAFHALPDLRSPDGHPTGAMHGMVNMLRRLRADYPAAYIACVFDA
KGKTFRDDLYPEYKATRASMPDDLSLQIEPIHEAVKAMGWPILMVEGVEADDVIGTLSVT
AEKNGMDVIISTGDKDLAQLVTPHVTLINTMTNEKLDEAGVVAKFGVPPNRIIDYLTLIG
DTVDNVPGVSKCGPKTAVKWLTQYDSLDGVIANADKVTGAVGENLRAALDWLPKGRELIT
VKTDCDLAQHMMSITESLVARDEDHESLLAFFTKYGFKTLLRELKALTPSTAVAGQTTPA
APEGATGDMFAQPPANVRYETLLTEAQLDEWIARIQAAELVSLDTETTSLEPMNAQLVGI
SMATEPGLACYIPVAHRYAGAPEQLPRELVLEKLKPWLEDASKCKLGQNLKYDAHIFANH
GVTLRGIVHDTLLQSYVFESHRTHDMDSLAMRHLNHKTIPYEDVCGKGANQICFDQVEVQ
RATEYAAEDADITLRLHLAMHGHVEGDEGLTKVYRNIELPTAVVLQKIERNGVLIDAALL
QTQSSELGARIAELEQKAYELAEGPFNLGSPKQIGEIFFNKLKLPVVKKTPSGAPSTDEE
VLQKLAEDYPLPKVLLEYRGMAKLKSTYTDKLPKMINPQTGRVHTNYAQAVAVTGRLASN
DPNLQNIPIRTAEGRRIREAFVAPEGSHIVSADYSQIELRIMAHISEDPAMLKAFAEGED
IHRATAAEIFGVAPGEVSSEQRRYAKVINFGLIYGMSAFGLAANLGIDRTAAQNYIDRYF
QRFAGVKRYMDETRLEAKANGYVKTVFGRRLWLPEINSPNGPRRQAAERAAINAPMQGTA
ADLIKLAMIAVQDWLEKENLKARMIMQVHDELVLEVPDDELALVKETLPKLMAGVAELKV
PLVAEVGVGRNWEEAH
NT seq 2751 nt   +upstreamnt  +downstreamnt
atgcaaaaaactctgctgctggtcgacggttccagctatctctaccgtgccttccacgcg
ctgcccgacctgcgcagcccggacggccacccgaccggtgcgatgcacggcatggtcaac
atgctgcgccggctgcgcgccgattacccggccgcgtacatcgcctgcgtgttcgatgcc
aagggcaagacgttccgcgatgacctgtacccggaatacaaggcgacccgcgcgtcgatg
ccggacgacctgtcgctgcagatcgagccgatccacgaggccgtgaaggcgatgggctgg
ccgatcctgatggtcgagggcgtggaggcggacgacgtgatcggcaccctgtccgtcacg
gccgagaaaaacggcatggacgtgatcatctcgaccggcgacaaggacctggcccagctg
gtcacgccgcacgtcaccttgatcaacacgatgaccaacgagaagctcgacgaagcgggc
gtggtggcgaaattcggcgtgccgccaaaccgcatcatcgattacctgacgctgatcggc
gacaccgtcgacaacgtgcccggcgtgagcaagtgcggtccgaagacggccgtgaaatgg
ctgacgcagtacgacagcctcgatggcgtcatcgccaacgccgacaaggtcacgggcgcc
gtcggcgagaacctgcgcgcggcgctggactggctgccgaagggccgcgaactgatcacg
gtgaagacggactgcgacctggcgcagcacatgatgtcgatcaccgaatcgctggtggcg
cgcgacgaggaccatgaatcgctgctggcgttcttcacgaagtacggcttcaagacgctg
ctacgcgagctgaaggcgctgacgccgtcgacggccgtcgcgggccagacgacgccggct
gccccggaaggcgcgacgggcgacatgttcgcccagccgccggcgaacgtgcgctacgaa
acgctgctgacggaagcgcagctggacgagtggatcgcccgcatccaggccgccgaactg
gtgtcgctggatacggagacgacgtcgctcgaaccgatgaacgcgcagctggtgggcatc
tcgatggccaccgagccgggcctggcctgctacatcccggtggcgcaccgctatgccggc
gcgccggaacagctgccgcgcgagctggtgctggaaaaactcaagccctggctggaagac
gccagcaagtgcaagctgggccagaacctgaagtacgacgcgcacatcttcgccaaccac
ggcgtgacgttgcgcggcatcgtgcacgacaccttgctgcaatcgtacgtgttcgaatcg
caccgtacgcacgacatggacagcctggcgatgcgccacctgaaccacaagacgattccg
tacgaggacgtgtgcggcaagggcgccaaccagatctgcttcgaccaggtcgaagtgcag
cgcgccaccgaatacgcggccgaggatgccgacatcacactgcgcctgcacctggcgatg
cacggccacgtggaaggcgacgaaggcttgacgaaggtgtaccgcaacatcgagctgccg
acggccgtcgtgctgcagaagatcgaacgcaacggcgtgctgatcgacgcggcgctgctg
cagacgcagtcgagcgagctgggtgcgcgcatcgccgagctggaacagaaggcttacgag
ctggccgagggcccgttcaacctgggttcgccgaagcagatcggtgagatcttcttcaac
aagctgaagctgccggtggtgaagaagacgccgagcggcgcgccgtccaccgacgaggaa
gtgctgcagaagctggccgaggactacccgctgccgaaggtgctgctggagtaccgcggc
atggccaagctgaagtccacgtacacggacaagctgccgaagatgatcaacccgcaaacg
ggccgggtgcacacgaattatgcgcaggcggtcgccgtgacggggcgcctcgcatcgaac
gatccgaacctgcagaacatcccgatccgcacggcggaagggcggcgcatccgcgaggcg
ttcgtcgcgccggaaggcagccatatcgtgtcggccgactattcgcagatcgagctgcgc
atcatggcgcacatctcggaagacccggcgatgctgaaggcgtttgccgagggcgaggac
atccaccgcgcgacggctgccgagatcttcggcgtggccccgggcgaggtgtcgagcgaa
cagcggcgctacgcgaaggtgatcaacttcggcctgatctacggcatgagcgcattcggc
cttgccgccaacctgggcatcgaccgcacggcggcgcagaactacatcgaccgctacttc
cagcgcttcgccggcgtgaagcgctacatggacgagacgcggctggaagccaaggcgaac
ggctacgtgaagacggtattcggccggcgcctgtggctccccgagatcaactcgccgaac
ggcccgcgccgccaggcagcggaacgcgcggccatcaacgcgccgatgcagggcacggcg
gcggacctgatcaagctggcgatgatcgccgtgcaggactggctggaaaaggaaaacctg
aaggcgcgcatgatcatgcaggtgcacgacgaactggtgctggaagtcccggacgacgag
ctggcgctggtgaaggaaacgctgccgaagctgatggccggcgtcgccgaactgaaggtc
ccgctggttgccgaggtgggtgtggggaggaattgggaggaggcgcactga

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