Pseudoduganella flava: GO485_24090
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Entry
GO485_24090 CDS
T06346
Symbol
prpR
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
mfla
Pseudoduganella flava
Brite
KEGG Orthology (KO) [BR:
mfla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mfla03000
]
GO485_24090 (prpR)
Transcription factors [BR:
mfla03000
]
Prokaryotic type
Helix-turn-helix
Other families
GO485_24090 (prpR)
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Paralog
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GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
Xre-like-HTH
HTH_psq
AAA_2
AAA
HTH_23
HTH_17
Motif
Other DBs
NCBI-ProteinID:
QGZ41833
LinkDB
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Position
complement(5607320..5608912)
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AA seq
530 aa
AA seq
DB search
MAYPTSPPPDADKPVIWTVSVSRLSDLFRDITPEYDALATIEPIQLGFDDAVRHIRERLA
TERCDAVISAGSNAAYLKGRLPVPVIVAKASGTDMMRALARARRVSDRIAVITYQQPMPE
LADFAATFGIDVEERTYVTREDARAQVTELKAAGIRAIVGAGLITDLAEEAGLTGVFVYS
SASIRQAFDDALEIARFAQLEVGRRRSRGGGVQDTLRARHGLADLRGESAAMEQVRQACV
LYARSNATVLIQGETGSGKELAAQAIHRAAPHGASRPFLAVNCGALAESLLESELFGHEE
GAFTGARRGGRPGLFEAASGGTLFLDEIGEMPLALQTRLLRVLEEREVVRVGGTRPIPVD
VRIVSATHCDLAQRVRDGRFRADLFYRLAVLRLALPPLRERAADIVPLAEWLLRNALAAL
GARASPNLKAELQACAPLLMRHAWPGNVRELRNLCERLALFLAAEPLQALTPPFMLGIAP
ELADAGAAPPASESVTEVLRRFGGRRDAAADYLGISRTTLWRRLREETGA
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcctaccctacttctccgccgccggacgccgacaagccggtcatctggaccgtttcc
gtctcccggctgtcggacctgttccgcgacatcacgcccgaatacgacgcgctcgcgacg
atcgagccgatccagctcggcttcgacgacgccgtgcgccacatccgcgaacggctggcc
acggagcgctgcgacgccgtcatctcggccggctcgaacgccgcctacctgaaaggccgg
ctgcccgttcccgtcatcgtcgcgaaagccagcggcacggacatgatgcgcgcgctggcg
cgggcccggcgcgtgtccgaccggatcgccgtcatcacctaccagcagccgatgccggaa
ctggccgacttcgcggccacgttcgggatcgacgtcgaggagcgcacctacgtgacgcgc
gaggatgcgcgggcccaggtcaccgagttgaaggcggccggcatccgcgcgatcgtcggc
gcggggctgatcacggacctggccgaggaggcgggattgacgggggtgttcgtctattcg
tccgcatcgatccgccaggcgttcgacgacgcgctggagatcgcccgctttgcccagctg
gaggtgggccggcggcgcagccgcggcggcggcgtgcaggacacgctgcgcgcccgccac
ggcctggccgacctgcgcggcgaatcggcggcgatggagcaggtgcgccaggcttgcgtg
ctgtatgcgcgctcgaatgccacggtactgatccagggcgagacgggcagcggcaaggag
ctggccgcgcaggcgatccaccgcgccgcgccgcacggtgccagccgcccattcctggcc
gtgaactgcggcgcgctcgctgaatcgctgctggagtcggaactgttcggccacgaggaa
ggcgcgttcacgggggcgcgccggggcggccggcctggcctgttcgaagcggccagcggc
ggcacgctgttcctcgacgagatcggcgaaatgccgctggccctgcagacgcgcctgttg
cgggtgctcgaggaacgcgaggtcgtgcgcgtcggcggcacgcggccgattccggtggac
gtgcgcatcgtcagcgctacccattgcgacctcgcccagcgcgtgcgcgacggccgtttt
cgcgccgacctgttctaccgccttgccgtgctgcgccttgcgctgccgccgctgcgcgag
cgtgctgcggatatcgtgccgctcgccgaatggctgctgcgcaatgcgctcgcggcgctg
ggcgcgcgtgcgtcaccgaacctgaaggcggaattgcaggcctgcgcgccgctgctgatg
cgccatgcgtggcccggcaacgtgcgcgagctgcgcaatctgtgcgagcgcctggcgctg
ttcctggccgcagaaccgctgcaggcgttgaccccgccgttcatgctcggcatcgcgccg
gagctggccgacgccggcgctgcgccgcccgcatcggaaagcgtgaccgaggtgctgcgc
cgctttggcggccggcgcgatgcggcggccgactacctgggcatcagccgcacgacgctg
tggcgccggctgcgcgaagagactggcgcctga
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