Pseudoduganella flava: GO485_24120
Help
Entry
GO485_24120 CDS
T06346
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
mfla
Pseudoduganella flava
Pathway
mfla03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mfla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GO485_24120 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfla03400
]
GO485_24120 (xth)
Enzymes [BR:
mfla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
GO485_24120 (xth)
DNA repair and recombination proteins [BR:
mfla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
GO485_24120 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Allatotropin-like_C
Motif
Other DBs
NCBI-ProteinID:
QGZ41838
UniProt:
A0A562Q528
LinkDB
All DBs
Position
complement(5618390..5619154)
Genome browser
AA seq
254 aa
AA seq
DB search
MKLATWNVNSLNVRLPHLLKWLEENPVDVICIQETKLTDDKFPKAAIEAAGYYVEFSGQK
TYNGVAILSRLPMTDVVRNNPLYPDDQQRILAATIDGIRVVCAYVPNGQAVDSDKYVYKL
AWMQAFKEWLASELAANPNLAVLGDYNVAPEDRDVHDPAVWEGEVHVSPRERAAFQALLE
VGLTDSFRLFEQPEKTYSWWDYRMLRFQKNQGLRIDHILLAAPLVARCTACVIDRAPRKW
QQPSDHTPVIATLG
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttgccacttggaacgtcaattccctgaatgtccgcctgccccacctgttgaag
tggctggaggaaaatcccgtcgacgtaatatgcattcaggaaacgaaattaacagacgat
aaattcccgaaggcagcgatcgaagcggccggctactatgtggagttttccggccaaaag
acttataacggcgtcgccatcctgtcgcgcctgccgatgacggacgtcgtgcgtaacaat
ccattgtatcccgacgaccagcagcgcatcctggccgcgacgatcgacggcatccgcgtc
gtctgcgcctacgtgccgaacggccaggccgtcgactccgacaagtacgtctacaagctg
gcctggatgcaggccttcaaggaatggctggcgagcgaactcgcggccaatccgaacctc
gcggtgctgggcgactacaacgtggcaccggaagaccgcgacgtgcacgatcccgccgtg
tgggaaggcgaggtacacgtgtcgccgcgcgagcgggcggccttccaggcgctgctggag
gtcggcctgacggattcattccgcctgttcgagcagcccgagaagacgtacagttggtgg
gattaccggatgctgcggttccagaagaaccagggcctgcgcatcgaccacatcctgctg
gcggcgccgctggtggcgcgttgcacggcctgcgtgatcgaccgcgcaccgcgcaagtgg
cagcagccgtccgatcacacccccgtgatcgcgacgctgggctga
DBGET
integrated database retrieval system
