KEGG   Pseudoduganella flava: GO485_28885
Entry
GO485_28885       CDS       T06346                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
mfla  Pseudoduganella flava
Brite
KEGG Orthology (KO) [BR:mfla00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mfla02044]
    GO485_28885 (tssC)
Secretion system [BR:mfla02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   GO485_28885 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: QGZ42655
UniProt: A0A562PH77
LinkDB
Position
6698694..6700181
AA seq 495 aa
MTSTQTDAGAAATATEELSLLDRIVQEGRMAVEPSQHAYAKKLLGQFAAQVLDEGMRTAP
DKGIVAAINERVAQIDKILTDQVNAILHDERFQALEGSWRGLRDMVFGTETGPKLKLRLL
NVTKKELLKDLEGAVDHDMSMLFKKIYEEEYGTFGGHPYSLFIGDYYFGRHPQDIALLER
LSKVAAAAHAPFIAAAAPSLFDMQEFTELGVPRDLSKIFESAEMTSWRGFRDSEDSRYVA
LVLPRYAARLPYGAKTNPVESFAFEEDVTGKDHGKYLWANAAYQLGLRITDAFAKHSWTT
AIRGVEGGGKITGMTAHAFKTDEGDVALKCPTEVFITDRREKELNDLGFIAVVNAKGSDT
AAFFGGQSVNKPKLYNLDAANANAALSSRLPYVLAASRFAHYIKVIMRDKIGSFQTRQGV
ENYLNNWLSDYVLLSANASQGEKARFPLSEGRVDVTEVAGKPGAYSATVFLKPHFQMEEL
TTSIRLVAELPAAAA
NT seq 1488 nt   +upstreamnt  +downstreamnt
atgaccagcacacaaaccgacgcgggcgccgccgccaccgccaccgaggaactcagcctg
ttggaccggatcgtccaggaaggccggatggcggtcgagccttcgcagcacgcgtacgcc
aagaagctcctcggccagtttgccgcccaggtgctcgatgaaggcatgaggacggcgccg
gacaagggcatcgtcgcggcgatcaacgaaagggtggcgcagatcgacaagatcctcacc
gaccaggtcaacgcgatcctccacgacgagcgcttccaggcgctggaagggtcgtggcgc
ggcctgcgcgacatggtgttcggcaccgagacggggccgaaactgaagctgcggctgctg
aacgtgacgaagaaggagctgctgaaagacctcgaaggcgccgtcgatcacgacatgagc
atgctgttcaagaagatctacgaagaggaatacggcaccttcggcggtcatccttactcg
ctgttcatcggcgactactacttcggccgccacccgcaggacatcgcgctgctcgaacgc
ctgtcgaaggtggccgccgccgcccatgcgccgttcatcgccgccgccgcgccgtcgctg
ttcgacatgcaggagttcaccgagctgggcgtgccgcgcgacctgtcgaagatcttcgag
agcgccgagatgacgtcgtggcggggtttccgcgactccgaggattcgcgctacgtggcg
ctggtgctgccgcgctatgcggcgcgcctgccgtacggcgcgaagaccaatcccgtcgaa
tcgttcgcgttcgaggaggacgtgacgggcaaggaccacggcaaatacctgtgggccaac
gcggcctaccagctgggcttgcgcatcaccgacgcgttcgcgaagcacagctggacgacg
gcgatccgcggcgtcgagggcggcggcaagatcaccggcatgacggcccatgcgttcaag
acggacgagggcgacgtcgcgctgaagtgccccaccgaggtgttcatcacggaccggcgc
gagaaggagttgaacgacctgggcttcatcgcggtcgtcaacgcgaagggctccgatacg
gcggcgttcttcggcggccagtccgtcaacaagccgaagctgtacaacctggatgcggcg
aacgccaacgcggcgctgtcctcgcgcctgccgtacgtgctggccgcgtcgcgcttcgcc
cattacatcaaggtgatcatgcgcgacaagatcggcagtttccagacccgccagggcgtg
gagaactacctgaacaactggctctccgactacgtgctgctgagcgccaacgcgtcgcag
ggcgagaaggcccgcttcccgctctccgaagggcgggttgacgtgaccgaggtcgccggc
aagccgggcgcgtattcggccaccgtgttcctgaagccgcacttccagatggaggagctg
accacctcgatccggctggtggcggaactgcccgccgccgcggcctga

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