Methyloraptor flagellatus: ABS361_02505
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Entry
ABS361_02505 CDS
T10624
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
mflg Methyloraptor flagellatus
Pathway
mflg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mflg00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ABS361_02505 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mflg03021
]
ABS361_02505 (rpoD)
Transcription machinery [BR:
mflg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABS361_02505 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Phage_DsbA
DUF4168
Motif
Other DBs
NCBI-ProteinID:
XBY45185
UniProt:
A0AAU7XBM8
LinkDB
All DBs
Position
complement(525235..527250)
Genome browser
AA seq
671 aa
AA seq
DB search
MATKAAEQEETEAQAPETQDGPLLDLSDAAVKRMIKLAKKRGFVTYDELNEVLPSEEVTS
EQIEDILAMLNEMGINVVETDEAEDQEEGGAKAQSGAGGGDEEEVEGGDLVEATSSAPAL
TKAAREPADRTDDPVRMYLREMGSVELLSREGEIAIAKRIEAGREAMIAGLCESPLTFQA
IIIWRDELNEGKILLRDIIDLEATYAGPDGKNAGGPPMVPVDEAEPSEAAEGDLPEGEQA
EDMEDDMEGNVSLSAMEAELKPKVVETFDRIADEYKKLRRLQEQLVEGRLKNETLSPSQE
RRHKKLKEDVVAEVKSLSLNQARIDALVEQLYDINKRLIGSEGRLLRLAESYGVGREDFL
KNYHNSELDPHWLRRVANLGTRGWRDFVKNEGEMIKEIRNQIHTLASETGLEITEFRRIV
HMVQKGEREARQAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYR
RGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKIVRTSRQMLHEIGREPTPEE
LAEKLGMPLEKVRKVLKIAKEPISLETPIGDEEDSHLGDFIEDKNAILPIDAAIQSNLRE
TTTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPS
RSRKLRSFLDN
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaaggctgccgagcaggaagaaaccgaagctcaggcccccgagacccaggac
ggtccgctgctcgatctgtccgatgccgccgtcaagcggatgatcaagctcgccaagaag
cgcggcttcgtcacctatgacgagctgaacgaggtgctgccttccgaagaggtcacctcc
gagcagatcgaagacattctggcgatgctcaacgagatgggcatcaacgtcgtcgagacc
gacgaggccgaggatcaggaagaaggcggcgccaaggcccagagcggcgccggcggcggc
gacgaggaagaggtcgaaggcggcgatctggtcgaggcgacctcgtccgcgccggcgctg
accaaggccgcccgcgagccggccgaccgcaccgacgatccggtgcgcatgtacctgcgc
gagatgggctcggtcgagctcctgtcgcgcgagggcgagatcgcgatcgccaagcgcatc
gaggccggccgcgaggcgatgatcgcgggcctctgcgagagcccgctgaccttccaggcc
atcatcatctggcgcgacgagctcaatgaggggaagatcctcctccgcgacatcatcgat
ctcgaggcgacctacgccggcccggacggcaagaacgccggcggcccgccgatggtgccg
gtcgacgaggccgagccgtccgaggccgccgagggtgacctgcccgagggcgagcaggcc
gaggacatggaagacgacatggagggcaacgtctcgttgtccgccatggaggccgaactg
aagccgaaggtggtcgagaccttcgaccgcatcgccgatgagtacaagaagctgcgccgc
ctgcaggagcagctcgtcgaaggccggctgaagaacgagaccctgtcgccgtcgcaggag
cgtcgccacaagaagctcaaggaagacgtcgtcgccgaggtgaagagcttgtcgctcaac
caggcgcgtatcgacgccctggtcgagcagctctacgacatcaacaagcgcctgatcggc
tcggaaggccggctgctgcgtctggcggagtcgtatggcgtcggccgcgaggacttcctc
aagaactaccacaactccgagctcgacccgcactggctgcgccgcgtcgccaatctcggc
acgcgcggctggcgcgacttcgtcaagaacgaaggcgagatgatcaaggagatccggaac
cagattcacacgctggcgtccgagaccggtctcgagatcaccgagttccgccgcatcgtc
cacatggtgcagaagggcgagcgcgaggcgcggcaggcgaagaaggaaatggtcgaggcg
aacctgcgtctcgtcatctcgatcgccaagaagtacaccaaccgcggcctgcagttcctg
gacctgatccaggaaggcaacatcggcctgatgaaggcggtcgacaagttcgagtaccgc
cgcggctacaagttctcgacctacgcgacctggtggatccggcaggcgatcacccgctcg
atcgccgatcaggcccgcacgatccgcattccggtgcacatgatcgagacgatcaacaag
atcgtccgcacctcgcgccagatgctgcacgagatcggccgcgagccgaccccggaggag
ctggccgagaagctcggcatgccgctcgaaaaggtccgcaaggtcctgaagatcgcgaag
gagccgatcagcctcgaaaccccgatcggcgacgaggaggattcgcacctcggcgacttc
atcgaggacaagaacgcgatcctgccgatcgacgccgcgatccagtcgaacctccgcgag
accaccacccgcgtactggcctcgctgaccccgcgcgaagagcgcgtgctgcgcatgcgc
ttcggcatcggcatgaacaccgaccacacgctcgaagaggtcggccagcagttctcggtc
acccgcgaacgcatccgccagatcgaggcgaaggcgctccgcaagctcaagcatccgagc
cggtcgcgcaagctgcgctcgttcctcgacaattga
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