Methyloraptor flagellatus: ABS361_07900
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Entry
ABS361_07900 CDS
T10624
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mflg Methyloraptor flagellatus
Pathway
mflg03018
RNA degradation
Brite
Enzymes [BR:
mflg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
ABS361_07900
Messenger RNA biogenesis [BR:
mflg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ABS361_07900
Ribosome biogenesis [BR:
mflg03009
]
Prokaryotic type
rRNA processing factors
ABS361_07900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XBY46140
UniProt:
A0AAU7XE69
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All DBs
Position
1697506..1700316
Genome browser
AA seq
936 aa
AA seq
DB search
MANKMLIDATHPEETRVVVVRGSRVEEFDFEAASKKQLRGNIYLAKVTRVEPSLQAAFVD
YGGNRHGFLAFSEIHPDYYQIPMADRQALLEEEARIQAEADRDEGRRRPARAAAASENGD
EVSDEDAEDQVEVTGAEDALEELPERRSNPRSSRRQYKIQEVIKRRQILLVQVVKEERGN
KGAALTTYLSLAGRYSVLMPNTARGGGISRKITSPTDRKRLKAIATDLEVPEGMGVIVRT
AGAARTKAEIKRDFEYLLRLWENVRELTLKSSAPKLVYEEGSLIKRSIRDLYNKDIDEIL
VSGDDGYREAKDFMRMLMPSHAKNVQHYKEPTPIFTRFSVESQLDAMFSPQVTLRSGGYI
VINQTEALVSIDVNSGKSTREHNIEDTALQTNLEAAEEVSRQLRLRDLAGLIVIDFIDME
EKRNNRSVERKLKDCLKNDRARIQVGRISHFGLMEMSRQRIRTGVLESSMVICPHCAGTG
MVRSTESVALHVLRSLEESLIRHVTHDLIVRTRSAVALYILNQKRAHLFDLERRFGLEIT
ILADDHAASNGHLFTVEKGEPVTPRAIPVQQMVTPQSVAIDDEVEDLVDEVEEDEIEEDE
EAGESREPSRRDERPRGERGQGERGQGERASGERAQGERPQGERGEGDEGGRRRRRRRRR
GRGRNGEGDRPVGGQPRADRGEFVDDQAEEGDAEFEENEDLAAEGMETEGAETESNGGDA
EGGNGDQPRKKRRRGRRGGRRNRREGGENGAEGGFEAGSEDEGDDSDADGDESDAGEIRG
DAVEAVPAPAVEAPTVEAPAAEEIPDVVVIDRETLVAEVEAQKKPRKRAPAKPRAPRKTK
AGAAAEAAAAEGVQAEAEPVVPVPAVEPVVEAPAPAIEATVVEAAPASEAPVNVEAEVAS
EAEPEEAAPAKPELTSTEADPTKPKRSGWWARKGFL
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaagatgctcatcgacgccacccatccggaggagacccgggtggtggtggtc
cgtggcagccgcgtcgaggaattcgacttcgaggcggcctccaagaagcaactgcgcggg
aacatctatctcgcgaaggtgacccgggtcgaaccgtcgctgcaggcggcgttcgtcgac
tacggcggcaaccggcacggcttcctcgccttctccgaaatccatccggactactatcag
atcccgatggccgaccggcaggcgctgctcgaagaggaagcgcgcattcaggccgaggcc
gatcgtgacgagggccgtcgccggccggcgcgcgccgcggcggcgtccgagaacggcgac
gaggtgtccgacgaggacgccgaggaccaggtcgaggtgaccggtgcggaagacgcgctg
gaagagctgcccgagcgccggtccaacccgcgctccagccgtcgccagtacaagatccag
gaagtgatcaagcgccggcagatcctgctggtgcaggtcgtcaaagaagagcgcggcaac
aagggtgcggcgctcacgacctatctgtcgctcgccggccgctattcggtgctgatgccg
aacaccgcacgcggtggcggcatctcccgcaagatcacctcgccgaccgaccgcaagcgt
ctgaaggcgatcgcgaccgatctcgaagtgcccgagggcatgggcgtgatcgtgcgcacc
gccggcgcggcgcgcaccaaggccgagatcaagcgtgacttcgagtacctgctgcgcctg
tgggagaacgtgcgtgagctcacgctcaagtcctccgcgccgaagctggtctatgaagag
ggttcgctgatcaagcgctcgatccgcgacctctacaacaaggacatcgacgaaatcctg
gtctcgggcgacgacggctatcgcgaggccaaggacttcatgcgcatgctcatgccgagc
catgccaagaacgtccagcactacaaggagccgacgccgatcttcacccgcttctcggtg
gagagccagctcgacgcgatgttctcgccgcaggtcacgctgcgctccggcggctacatc
gtgatcaaccagaccgaggcgctggtctcgatcgacgtcaactccggcaagtcgacccgc
gaacacaacatcgaggacaccgcgctccagaccaatctggaagcggcggaagaggtgtcg
cgccagctcaggctgcgcgacctcgccggcctgatcgtgatcgacttcatcgacatggag
gagaagcggaacaaccgttccgtcgagcgcaagctcaaggattgcctcaagaacgatcgc
gcgcgcatccaggtcggccggatctcgcacttcggcctgatggagatgtcgcgccagcgc
atccgcaccggcgtgctcgagagctcgatggtgatctgcccgcactgcgcgggcaccggc
atggtgcgctcgaccgagtcggtcgcgctgcatgtgctgcgcagcctggaggagagcctg
atccgccacgtcacgcacgacctgatcgtgcgcacccgttcggcggtcgcgctctacatc
ctgaaccagaagcgcgcgcatctgttcgatctcgagcgccggttcggcctggagatcacg
atcctcgccgatgatcatgccgcctccaacggccacctgttcacggtcgagaagggcgaa
ccggtcacgccgcgggccatcccggtccagcagatggtcacgccgcagtcggtcgcgatc
gacgacgaggtcgaggatctggtcgacgaggtcgaagaggacgagatcgaagaggacgag
gaggccggcgagagccgcgagccgtcgcgtcgcgacgagcgtccgcgcggcgaacgcggc
cagggtgagcgtggccagggcgagcgcgcctcgggcgaacgggcccagggcgaacgtccg
cagggcgaacgcggcgaaggtgacgaaggcggccgccggcgtcggcgccggcgtcggcgc
ggccggggccgcaatggcgagggtgatcgtccggtgggcggccagccgcgtgccgatcgc
ggcgaattcgtcgacgatcaggccgaggagggcgacgccgagttcgaggagaacgaggat
ctcgccgccgagggcatggagaccgaaggcgccgagaccgagtcgaacggcggtgacgcc
gagggcggcaacggcgaccagccgcgcaagaagcgccggcgcggccgtcgcggcggccgt
cgcaaccgtcgcgaaggcggcgagaatggtgccgagggcggttttgaagccggttccgag
gacgagggcgacgacagcgacgccgatggcgacgagtcggatgcgggcgagatccgcggt
gacgcggtcgaggccgtgccggcgcccgccgtcgaggcgccgaccgtcgaagcgcccgca
gccgaggagatcccggacgtggtcgtgatcgaccgcgagacgctggtcgccgaggtcgag
gcgcagaagaagccgcgcaagcgggcgccggccaagccgcgcgcgcctcgcaagaccaag
gccggggccgccgcggaagcggccgccgccgaaggcgtgcaggccgaggccgagccggtg
gtgccggtgccggcggtcgagcctgtggtcgaggcccctgccccggcgatcgaagcgacg
gtcgtcgaggctgcgccggcgagcgaggctccggtcaacgtcgaggccgaggttgcgtcc
gaagccgaacccgaagaggccgcgccggcgaagccggagttgacctccacggaggcggat
ccgacgaagccgaagcggtccggctggtgggcgcgcaagggcttcctctga
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