Methyloraptor flagellatus: ABS361_08355
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Entry
ABS361_08355 CDS
T10624
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mflg Methyloraptor flagellatus
Brite
KEGG Orthology (KO) [BR:
mflg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mflg03032
]
ABS361_08355
03400 DNA repair and recombination proteins [BR:
mflg03400
]
ABS361_08355
Enzymes [BR:
mflg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ABS361_08355
DNA replication proteins [BR:
mflg03032
]
Prokaryotic type
DNA Topoisomerases
ABS361_08355
DNA repair and recombination proteins [BR:
mflg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABS361_08355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
XBY46220
UniProt:
A0AAU7XDU2
LinkDB
All DBs
Position
1813620..1814738
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AA seq
372 aa
AA seq
DB search
MLQHTAPIDPAEAVDPSTAIDSREAAESAGLRYLIDDRPGITRRRSGKGFSYRDPKGALI
KDAAVLGRIRALAIPPAWTEVWIAPNPRGHIQATGRDAKGRKQYRYHADFRAVRDEVKFK
HLVTFARLLPKIRERVDADMSRRGLPREKVLATVVRLLETTLIRVGNDDYARQNESYGLT
TLHARHVRVEGSDLKFRFKGKSGKLWNLGLKDRRIARIVRACQELPGQELFQYRDDDGEI
RDVTSADVNGYLREITGADITAKDFRTWAGTVLAAMALDEFEAFDTAAKAKKNLRAAIER
VAARLGNTPTICRKCYVHPDVVDAYLDRSLLLEIRREVEDELRDAIDALDPAEAAVLAFL
HARLRRRLDAAA
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagcacaccgcgccgatcgatcccgccgaagccgtcgacccttccaccgcgatc
gacagccgcgaggcggccgagagcgcgggactgcgctatctgatcgacgatcggcccggc
atcacgcggcgccggtccggcaagggcttctcctaccgcgaccccaagggcgcgctgatc
aaggatgcggccgtgctcggaaggatccgcgcgctcgccatcccgccagcctggacggaa
gtctggatcgcgcccaatccgcgcggccacatccaggcgaccggccgggatgccaagggg
cgcaagcagtatcgctaccacgccgatttccgtgcggtgcgcgacgaggtgaagttcaag
catctggtcaccttcgcccggctgctgccgaagatccgcgagcgggtcgacgccgacatg
tcgcggcgcggcctgccgcgcgaaaaggtactggcgaccgtggtccggcttttggagacg
acgctgatccgggtcggcaacgacgactatgcccggcagaacgagagctatgggctgacc
acgctgcacgcgcgccatgtccgcgtcgaaggctcggatctgaagttccgcttcaagggc
aagagcggcaaactgtggaaccttgggctcaaggatcggcgcatcgcccggatcgtgcgc
gcctgccaggaactgccgggccaggaactgttccagtatcgcgacgacgacggcgagatc
cgcgacgtgacctcggccgacgtcaacggctacctgcgcgagatcaccggcgcggacatc
accgccaaggacttccggacctgggccggcacggtgctcgccgccatggcactcgacgag
ttcgaggccttcgacacggccgccaaggccaagaagaaccttcgcgccgcgatcgaacgg
gtcgcggcgcggctcggcaacacgccgacgatctgccggaagtgctacgtccacccggac
gtggtcgacgcctatctcgaccgctcgctgctgctcgaaatccgacgcgaggtcgaggac
gagctccgcgacgcgatcgacgcgctcgatccggcggaggcggcggtgctggccttcctg
catgcccgcctgcgccgccggctcgatgcggccgcttga
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