Methyloraptor flagellatus: ABS361_08760
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Entry
ABS361_08760 CDS
T10624
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
mflg Methyloraptor flagellatus
Brite
KEGG Orthology (KO) [BR:
mflg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mflg03009
]
ABS361_08760 (rimO)
Enzymes [BR:
mflg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ABS361_08760 (rimO)
Ribosome biogenesis [BR:
mflg03009
]
Prokaryotic type
ribosomal protein modification factors
ABS361_08760 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
XBY46292
UniProt:
A0AAU7XDW6
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All DBs
Position
1906658..1908007
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AA seq
449 aa
AA seq
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MTDIATSEAPPSGPAPKISFVSLGCPKALVDSERIITQLRAEGYELTKSHGGADVVIVNT
CGFLDSAKAESLDAIGKAMGENGKVIVTGCMGAEPGPIIERFPNVLAITGPQAYESVVGA
VHEAVPPAHDPFVDLIPPQGVKLTPRHYAYLKISEGCNNRCTFCIIPKLRGDLVSRPAAD
VLREAEKLVKAGVKEILVISQDTSAYGVDLKYATSPWKDREVRAKFLDLSRELGELGVWI
RMHYVYPYPHVDEVIPLMSEGKILPYLDIPFQHASPTVLKAMRRPAAQEKQLERIQKWRE
ICPDLAIRSTFIVGFPGETEEDVDFLVDWLGEAKLDRVGCFKYEAVAGAPANEIAGAVPE
EVKEARWHRFMAAQQKVAERVQKARVGRRVQVIIDEPGPTVSKGRTKWDAPEIDGTTYVA
SRRPLRAGEIVTVKIERADAYDLHGVAVG
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacatcgcgacctccgaggcgcccccgagcgggccggcgccgaaaatctctttc
gtcagcctcggctgccccaaggcgctcgtcgacagcgagcgtatcatcacgcagcttcgg
gccgaaggctacgagctgaccaagagccatggcggcgccgacgtcgtcatcgtcaacaca
tgcggcttcctcgacagcgccaaggcggaaagcctcgacgcgatcggcaaggcgatgggc
gagaacggcaaggtcatcgtgaccggctgcatgggcgccgagcccggcccgatcatcgag
cgcttcccgaacgtgctggcgatcaccggcccgcaggcctacgagagcgtggtcggcgcg
gtgcacgaggcggtgccgccggcgcacgatccgttcgtcgacctgatcccgccgcagggc
gtcaagctgacgccgcgccattacgcctatctgaagatctccgagggctgcaacaaccgc
tgcaccttctgcatcattccgaaactgcgcggcgatctcgtctcgcgcccggcggcggat
gtgctgcgcgaagctgaaaagctggtcaaggccggcgtcaaggagatcctggtcatcagc
caggacacctccgcctacggcgtcgacctcaagtatgcgacctcgccctggaaggaccgc
gaggtcagagcaaaattcctggacctgtcgcgcgagctcggcgagctcggcgtctggatc
cggatgcactacgtctacccgtatccgcacgtcgacgaggtgatcccgttgatgagcgag
ggcaagatcctgccctacctcgacatcccgttccagcatgcgtcgccgacggtcctgaag
gcgatgcgccggcccgcggcgcaggagaagcagctcgagcggatccagaagtggcgcgag
atctgccccgatctcgcgatccgctcgaccttcatcgtcggcttccccggcgagaccgaa
gaggacgtcgacttcctggtcgactggctcggcgaggccaagctcgatcgcgtcggctgc
ttcaaatacgaggcggtcgcgggcgcgccggccaacgagatcgccggcgccgtgccggag
gaggtcaaggaggcgcgctggcacaggttcatggcggcgcagcagaaggtcgccgagcgc
gtccagaaggcgcgcgtcggccgccgcgtccaggtgatcatcgacgagccgggcccgacg
gtgtcgaagggccgcaccaagtgggacgcgccggagatcgacggcacgacctatgtcgcg
agccgccggccgctccgggccggcgagatcgtcaccgtgaagatcgaacgcgccgacgcc
tacgacctgcacggcgtcgcggtcggctga
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