KEGG   Methyloraptor flagellatus: ABS361_18810
Entry
ABS361_18810      CDS       T10624                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
mflg  Methyloraptor flagellatus
Pathway
mflg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mflg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ABS361_18810 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mflg03021]
    ABS361_18810 (rho)
   03019 Messenger RNA biogenesis [BR:mflg03019]
    ABS361_18810 (rho)
Transcription machinery [BR:mflg03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     ABS361_18810 (rho)
Messenger RNA biogenesis [BR:mflg03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     ABS361_18810 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_22 OB_RNB S1CSD-TOTE-2 NACHT AAA_25 AAA Fungal_virus_P2_C AAA_14 ATPase_2 Spore_III_AA
Other DBs
NCBI-ProteinID: XBY44075
UniProt: A0AAU7X8F9
LinkDB
Position
4174712..4175977
AA seq 421 aa
MQQLKLQDLKSKSPTELLSFAEELEVENASTLRKQELMFAILKQLAAKETEIIGEGVVEV
LQDGFGFLRSPDANYLPGPDDIYVSPSQIRRFSLRTGDTVEGHIRSPKEGERYFALLKVN
TINFEDPDKARHKVHFDNLTPLYPDERFKMELEEPTSKDMSQRIIDIVSPLGKGQRALIV
APPRTGKTVLLQNIAKSITANHPECYLIVLLIDERPEEVTDMQRTVKGEVVSSTFDEPAS
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIILDRKVADKRTFPA
LDITRSGTRKEELLVPSDMLKKTYVLRRILTPMGTVDAIEFLLDKLRQTKTNSDFFDSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcagcagttgaagcttcaggacctcaagtccaagtccccgacggaactcctctccttc
gccgaagagctcgaggtcgaaaacgcgagcacgctgcgcaagcaggagctcatgttcgcg
atcctgaagcagctcgcggccaaggagacggagatcatcggcgagggcgtcgtcgaggtc
ctgcaggacggcttcggctttctgcgttcgccggatgcgaactacctgccgggtccggac
gatatctatgtctcaccgtcgcagatccggcgcttctcgctgcgcaccggcgatacggtc
gagggccatatccgcagcccgaaggagggcgaacggtacttcgccctgctcaaggtcaac
acgatcaacttcgaagaccccgacaaggcgcgccacaaggtccacttcgacaatctgacg
ccgctctatccggacgagcggttcaagatggagctcgaggagccgacctcgaaggacatg
tcgcagcggatcatcgacatcgtgtcgccgctcggcaaaggccagcgcgcgctgatcgtc
gcgccgccccggaccggcaagacggtgctgctccagaacatcgccaagtcgatcacggcg
aaccatccggagtgctacctgatcgtcctgctgatcgacgagcgtccggaagaagtcacg
gacatgcagcgcacggtaaagggcgaggtcgtgtcgtcgaccttcgacgagccggcgtcg
cgccacgtccaggtcgccgagatggtgatcgagaaggccaagcgcctggtcgagcacggc
cgcgacgtggtgatcctgctcgactccatcacccgcctcggccgcgcctacaacacggtg
gtgccgtcctcgggcaaggtgctgaccggcggtgtcgacgccaacgcgctgcagcggccg
aagcgcttcttcggcgcggcgcgcaatatcgaggaaggcggttcgctgaccatcatcgcg
accgcgctgatcgataccggcagccgcatggacgaggtgatcttcgaagagttcaagggc
accggcaactcggaaatcatcctcgaccgcaaggtcgccgacaagcggacgttcccggcg
ctcgacatcacgcgttcgggcacccgcaaggaggagctgctcgtgccgtcggacatgctc
aagaagacctatgtcctgcgccgcatcctcacgccgatgggtacggtcgacgccatcgag
ttcctgctcgacaagctgcggcagaccaagacgaacagcgatttcttcgattccatgaac
acctga

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