Marinobacter flavimaris: ACGK9W_08055
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Entry
ACGK9W_08055 CDS
T10818
Name
(GenBank) DEAD/DEAH box helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
mfli Marinobacter flavimaris
Pathway
mfli03018
RNA degradation
Brite
Enzymes [BR:
mfli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACGK9W_08055
Messenger RNA biogenesis [BR:
mfli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACGK9W_08055
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XKQ63156
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Position
complement(1735836..1737119)
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AA seq
427 aa
AA seq
DB search
MTSDPKHTGDLRFSDLNLDKRLLDAITAIGFEYCTPIQAETLPWTLACEDLIGQAQTGTG
KTAAFLITAIQSLLETPIPETDRFASEPRVLALAPTRELAMQIAKDAEQLCQHTGHNVVT
VVGGMNYDKQRDQLQNEIVDILVATPGRLIDFLGSQDVFLDQLDILILDEADRMLDMGFI
PDVKRIIRKCTPKDERQTLLFSATFNQDVLNLASMWTSNAEFVEIEPEQKTAERVEQTVY
LVGDDEKLPVLVNFLKRPEVEKALVFANRRDQCRDLEEDLRNQGVKVALMSGEIAQNKRL
KTLDQFKKGSIQVLVATDVAGRGIHVNGVTHVFNYNLPDNAEDYVHRIGRTGRAGKHGVS
ISFAGEDDSFALPAIETYISQKLKTAVPDEALMAPMDNPPITRKRGRRPQGSGGRGQGGR
NQRQRRN
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgacatctgacccaaaacacaccggcgacctgagattcagcgatctgaacctcgacaag
cgcttgctggatgccatcacggctatcggttttgaatattgcacacccatccaggcggaa
acactgccctggacgctggcctgtgaggatctgattggccaggcccagaccggcaccgga
aaaaccgcagcgtttctgattacggcgattcaaagccttctggagacgccgattcccgaa
acagaccggtttgcgtcagagccgcgggtgctggccctggcaccgacacgtgagttggcc
atgcagatcgccaaggacgcagagcagttgtgccagcataccggccataatgtggtgacg
gttgtgggcggcatgaactatgacaagcagcgggaccagttgcagaacgagatcgtcgat
attctcgtggcgactccggggcgcctgatcgattttctcggctcccaggacgtatttctg
gaccagctcgacatcctgattcttgatgaagctgatcgtatgctggacatgggcttcatt
ccggacgtgaagcgcattatccgcaagtgcacacccaaggatgagcgccagacactcctg
ttcagcgccaccttcaaccaggacgtgctgaatcttgcctccatgtggacgagtaatgca
gagttcgtggagatagaaccggaacagaaaacggcggaacgggttgagcagacggtgtac
ctggtgggcgacgatgaaaaacttccggtgctggtcaattttctcaagcgtccggaagtg
gaaaaggcgctggtgtttgccaaccgccgggatcagtgccgtgacctggaagaggatctg
aggaaccagggggtcaaagttgccctgatgtcaggcgaaatagcccagaacaagcgcctc
aaaaccctggaccagttcaaaaaaggcagcatccaggtcctggtggccaccgatgtggct
ggccgtggtattcacgtcaacggcgtcacccacgttttcaactacaatctgcctgataat
gccgaagattatgtgcaccggattggccgcacaggcagggctggcaaacacggggtttcc
atcagttttgccggtgaggatgactcgttcgcgcttcccgccatcgaaacctacatcagc
cagaagctgaagactgccgtgcccgatgaggcgctcatggcgccgatggacaacccgccg
attacccgcaagcgcggccgacgcccacagggttccggcggccgtggccagggcggacgt
aatcagcgccagcgcaggaactga
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