Marinobacter flavimaris: ACGK9W_12115
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Entry
ACGK9W_12115 CDS
T10818
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
mfli Marinobacter flavimaris
Brite
KEGG Orthology (KO) [BR:
mfli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfli03400
]
ACGK9W_12115
DNA repair and recombination proteins [BR:
mfli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
ACGK9W_12115
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
DUF7577
AAA_22
AAA
SLFN-g3_helicase
AAA_30
AAA_16
Zn_ribbon_3
zf-tcix
DZR
Zn_Ribbon_1
CobA_CobO_BtuR
T1R_D3-like
SNF2-rel_dom
Prot_inhib_II
Motif
Other DBs
NCBI-ProteinID:
XKQ59856
LinkDB
All DBs
Position
complement(2564025..2565782)
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AA seq
585 aa
AA seq
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MNAPFKLRPYQQEAVDATLAHFRKTDESAVIVLPTGAGKSLVIAELARLAKRRILVVTHV
KELVEQNHAKYQSYGLTGGVFSAGLKRKESHHQVTFASVQSVSANLDQFRDEYSLVIIDE
CHRVSGEETSQYQRIIELLRQQNDSLKVLGLTATPYRLAMGWIYRYHYRGFVRGEDDKPF
QYCIYELPLNYMINRGYLTRPELVNAAVAQYDFSALPQDRFGEYAERDVNQLLSKHKRVT
RAIIEQVVELAAERQGVMIFAATVEHAREVAGYLPEHETALITGATDLKDRDLLIQRFKQ
RQLKYLVNVSVLTTGFDAPHVDFIAILRPTQSVSLYQQIVGRGLRLDEGKQDCLVIDYAG
NHVNLHHPEVGEPKPNPDSEPVQVFCPGCGFANIFWGKTDDDGRVIEHYGRRCQGLLEPV
DGVQDERPQQCDYRFRFKECPHCGAENDIAARNCHQCQKAIIDPDDQLRDALKLKDAMVI
RCAGISLVADGSKLKITYHGEDGEELGESFDFSKPGQRAVFNKMFGRRFANSQAPKEFSS
ADEVLELEALLPAPDFVIARKQKHYWQVQERVFDYQGQFRKANEV
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctcctttcaaactccggccttatcagcaggaagcggttgatgccacgctggct
cattttcgaaaaaccgatgagtccgccgttatcgtgctgccaaccggtgctgggaaaagc
ctggttattgccgagttggcgcgtctcgcgaagcgaaggatcctggtggtaacccacgta
aaggagctggtggagcagaatcacgcaaagtatcagagttatggattaaccggcggggtt
ttctctgccgggctgaagcggaaggaaagtcaccaccaggtgacctttgccagtgtgcag
tcggtatcagcgaacctggatcagtttcgggacgaatactcgctggtcattatcgatgaa
tgccatcgggtcagcggggaagaaaccagtcagtatcagcgcatcatagagctcttgcgg
caacagaacgattctctgaaagtgctcgggctgactgcgacgccttaccgtctggccatg
ggctggatctatcgctatcactatcggggctttgttcggggcgaggatgacaagcccttt
cagtactgcatttacgagctaccgctgaattacatgatcaatcgagggtatctcacccgg
ccggagctggtgaacgcggcagtggcgcaatacgatttctctgcgctgccccaggaccgc
tttggcgaatacgccgagagggacgttaaccagctgctgagcaaacataagcgcgtgacc
cgggcgatcattgagcaggttgtggagttggctgccgagcgtcagggcgtgatgatcttt
gcggccaccgtggagcatgcgcgggaggttgccgggtacctgccagaacacgaaactgcc
ttgataacgggcgccaccgatctgaaggatcgggacttgctgattcagcgcttcaagcag
cggcagttgaaatatctggtgaacgtgtctgtgctcaccacgggctttgatgcgccccat
gtggacttcatcgccattcttcggcccacccagtcggtgagtctctatcagcagattgtg
ggccgtggtcttcgtctggacgaaggcaagcaggattgccttgtaattgattacgccggc
aaccatgtaaacctgcatcacccggaggtgggggagccgaaaccgaaccctgatagtgag
ccggtgcaggtgttctgcccgggctgcgggtttgccaatatcttctggggcaaaacagac
gatgatggccgtgtgatcgagcactacggccgccgttgccaggggctgctggagccggtt
gacggggttcaggatgaacgcccgcagcagtgcgattaccgtttccgcttcaaggagtgc
ccgcattgcggggccgagaatgatatcgcagcccgtaactgccaccagtgccagaaagcc
atcatcgacccggatgatcagctgagagatgcgctgaaactcaaggatgccatggtcatc
cgctgcgccgggatatcgctggttgccgatggcagcaagttgaagatcacctatcacggg
gaagatggggaagaactcggcgagtcgtttgatttcagcaagccgggccaacgcgctgtt
tttaataaaatgttcgggcgtcgctttgccaatagccaggccccgaaagagttcagctca
gcggatgaggtgcttgagctggaggccttattgccggcaccggatttcgtgattgcgcgt
aagcagaagcactattggcaggtgcaggaacgggtttttgattatcaggggcagtttcgg
aaggcgaatgaagtttag
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