Marinobacter flavimaris: ACGK9W_13470
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Entry
ACGK9W_13470 CDS
T10818
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mfli Marinobacter flavimaris
Pathway
mfli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACGK9W_13470 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfli03019
]
ACGK9W_13470 (pnp)
03016 Transfer RNA biogenesis [BR:
mfli03016
]
ACGK9W_13470 (pnp)
Enzymes [BR:
mfli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACGK9W_13470 (pnp)
Messenger RNA biogenesis [BR:
mfli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACGK9W_13470 (pnp)
Transfer RNA biogenesis [BR:
mfli03016
]
Prokaryotic type
tRNA degradation factors
ACGK9W_13470 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH_2
KH-I_KHDC4-BBP
OB_RRP5_4th
APC_15aa
Motif
Other DBs
NCBI-ProteinID:
XKQ63740
LinkDB
All DBs
Position
complement(2848530..2850644)
Genome browser
AA seq
704 aa
AA seq
DB search
MKPFKKSFELGGKTVTLETGRIARQATGSVLVTVDDISVLGTVVGAKEAKPGQPFFPLTV
NYFEKTYAVGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPNGFMNEVQVITTVMSSS
KNQDPDIAAMLAASAALSISGIPFDGPIGASRVGYTNERGYFLNPTFEELQTSLLDMVVA
GTEDAVLMVESEAKGLTEDQMLGGVLYGHQEMQTAVTAIKEFAAEIGKPRWDWQPAAENT
ELLNAIKADFAGAIEEAYGIRDKMARYERLGEVKAAAVEKLAGEEEGQPSEDEVKKYFGK
IEKSVVRQQVIDGKPRIDGRDNKTVRPIEIEVGVLPSVHGSALFTRGETQAIVTTTLGTS
RDVQIIDALEGERKDPFLFHYNFPPYSVGEAGRVGTPGRREVGHGRLAKRGVLAVMPTLE
EFPYAIRAVSEITESNGSSSMASVCGSSLALMDAGVPIKAPVAGIAMGLVKEGDKFAVLT
DILGDEDHLGDMDFKVAGTQEGVTALQMDIKINGITDEIMEIALEQAHAARLHILGEMNK
VISEPRAELSARAPSITTIKINPEKIRDVIGKGGSVIRAICDETGASIDLDDDGNVKIYA
DNQEAAQAAVNRVKEITAEIEVGAIYKGRVERIVDFGAFVNILPGKDGLVHISQISDRRI
ENVTDELSEGQEVLVKVLDVDNRGRVKLSMKEIKEGDQPTDFSA
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
ctgaaacctttcaagaaatcatttgagcttggcggcaaaaccgtcactctggagaccggc
cgtattgcccgtcaggcaaccggttccgtactggtaaccgtggatgatatttccgttctc
ggcaccgttgttggcgccaaagaagccaagcccggccagccgttcttcccgctgaccgtg
aactacttcgagaagacctacgccgtgggcaaaatccccggtggcttcttcaagcgcgaa
ggtcgtccttccgaaaaggaaacgctgacctcacgcctgatcgaccgtccgattcgtccg
ctgttcccgaacggcttcatgaacgaagttcaggtcatcaccacggtcatgtcctccagc
aagaaccaggacccggatattgccgcgatgctggcggcgtctgccgctctgtccatctcc
ggtattccgttcgatggccccatcggtgcgtcccgcgtgggttacaccaacgagcgcggt
tacttcctgaacccgacgtttgaagaactgcagacctccctgctggatatggtcgttgcc
ggtactgaagacgcggttctgatggttgaatccgaagccaaaggcctgaccgaagaccag
atgctgggcggcgtgctttatggtcatcaggaaatgcagacagcggttaccgccatcaag
gaatttgctgctgaaatcggcaagccccgttgggactggcagccggccgccgagaacacc
gagctgctgaatgccatcaaggccgactttgccggtgctatcgaggaagcctacggcatc
cgtgacaagatggcccgctacgagcggcttggcgaagtaaaagccgctgccgttgagaaa
ctggccggtgaagaggaaggccaaccttccgaagacgaagtcaaaaagtacttcggcaag
atcgagaagagtgtggttcgccagcaggtcattgatggcaagccgcgaatcgatggtcgt
gacaacaagactgtccgtccgatcgaaattgaagtgggtgttctgcccagcgtacacggt
tccgccctgtttacccgtggcgagacccaggccatcgtgaccaccactctgggtacgtcc
cgtgatgtgcagatcattgatgctctggaaggcgagcgcaaggacccgttcctgttccac
tacaacttccctccgtactccgtgggtgaagctggccgtgtaggcaccccgggccgccgc
gaagttggtcacggtcgtctggccaagcgtggtgttctggctgttatgccgacactggaa
gaattcccgtacgcgatccgtgcggtttccgagatcaccgagtccaacggttccagctcc
atggcctctgtctgtggttccagcctggcgctgatggacgcgggtgtacccatcaaggca
ccggttgccggtatcgccatgggtctggtcaaggaaggcgacaagttcgcggttctgact
gatatcctgggtgacgaagatcacctgggcgacatggacttcaaggtggccggtacccag
gagggcgtgaccgccctgcagatggatatcaagatcaacggcatcaccgacgagatcatg
gaaatcgctctcgagcaggctcacgctgcgcgtctgcatatcctgggcgagatgaacaag
gtgatctccgagccgcgtgccgagctgtctgcccgtgcgccgagcatcaccaccatcaag
atcaatccggagaaaatccgcgacgttatcggtaagggcggttctgttatccgcgcgatc
tgtgacgagaccggcgcctccatcgatctggatgatgatggcaacgtgaagatctacgcc
gacaaccaggaagctgcccaggcggcggttaaccgggtcaaggaaatcacggccgagatc
gaagtgggtgctatctacaagggccgcgtagagcgcattgtagacttcggtgccttcgtt
aacatcctgcctggcaaggatggtctggtgcacatttcccagatctctgatcgccgcatc
gagaacgtgactgacgagctgagcgaaggtcaggaagttctggtgaaggtgctggatgtg
gacaaccgtggtcgcgtgaagctgtccatgaaggaaatcaaggaaggcgatcagccgacc
gatttctctgcctga
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