Marinobacter flavimaris: ACGK9W_15175
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Entry
ACGK9W_15175 CDS
T10818
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mfli Marinobacter flavimaris
Pathway
mfli03420
Nucleotide excision repair
mfli03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mfli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACGK9W_15175 (uvrD)
03430 Mismatch repair
ACGK9W_15175 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfli03400
]
ACGK9W_15175 (uvrD)
Enzymes [BR:
mfli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACGK9W_15175 (uvrD)
DNA repair and recombination proteins [BR:
mfli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACGK9W_15175 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
ACGK9W_15175 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
XKQ60440
LinkDB
All DBs
Position
complement(3224134..3226299)
Genome browser
AA seq
721 aa
AA seq
DB search
MDVSHIIDPLNDAQREAVTAQNDHLLVLAGAGSGKTRVLVHRIAWLMTVDRVPPTGILAV
TFTNKAAKEMRYRIEQMMDIPARGLWFGTFHGIAHRLLRSHWKDAGLPENFQVLDSDDQL
RLIKRVIRENQIDESKWPPKQAQWFISSQKDEGLRADHIQENPGDHFLSIMLKIYRQYEK
LCQQGGLVDFGELLLRSHELWLHRPELLAHYQSRFQHILVDEFQDTNTIQYAWLQVLASN
RVPMTVVGDDDQSIYGWRGAKVENIQQYQRDFPNARLVRLEQNYRSTQMILKAANAVIAN
NQGRLGKELWTDGPEGEPISLYAAFNEQDEANYIADSISAWVQDGNLRSESAILYRSNAQ
SRVLEESLMRQGIPYRVYGGLRFYDRQEIRNALAYLRLVQYRRDDAAFERVVNVPPRGIG
AKSLAELREYATEQSISLWESAERLLEAGQVKGRAKTGLQSFIAIIEGLSDMVGDASLHG
LMKQTIENSGLKDYHASEKGEKGQARVENLEELVNALSDYEVEDGVDALSEFIAQAALDA
GESQAEDHEDSVQLMTLHSAKGLEFPLVFLAGVEEGLFPHGMSLEEPGRMEEERRLAYVG
ITRAMKKLVLTYAESRRLYGQEKFNALSRFVREIPGDCLLEVRLRNTVTRPAMVARPNES
MFSQDSAQQSGFSLGQRVRHPKFGEGIVMNSEGTGHHTRVQVNFDEGAKWLVLAYAPLEA
C
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggacgtctcccacatcatcgatccgttgaacgatgcccagcgtgaagctgttaccgct
cagaacgatcaccttttggttctggccggcgcaggaagtggcaaaacccgtgttctggtg
cacaggatcgcctggttgatgaccgtggatcgggtgccgcccactggaatcctggcggtg
accttcaccaacaaggccgccaaggaaatgcgttaccgcatcgagcagatgatggacatt
ccggcccgcggcctttggttcggcacctttcatggtatcgcgcaccgactgctgcgttcg
cactggaaagatgctgggctgccggagaacttccaggttctggacagcgacgaccagctg
cgactgatcaagcgggtgatacgggaaaaccagattgatgagagcaagtggccaccgaag
caggcccagtggtttatcagtagccagaaggacgaggggctgcgggcggatcacatccag
gagaatccgggcgaccatttcctgtcgatcatgctgaagatctatcgccagtacgaaaaa
ctctgccagcagggtggtctggtggattttggcgagttgttgctgcgatcccatgaactg
tggctgcatcgtccggagctgctggcccattaccagagccggttccagcatatcctggtg
gacgagtttcaggacaccaacaccattcaatatgcctggctgcaggtgctggccagcaat
cgcgtgccaatgacggtggtgggggacgacgatcagtctatctacggctggcggggcgcc
aaggtcgaaaacatccagcagtaccagcgggatttccccaatgcccggttggtgcgtctg
gagcagaattaccgctccacccagatgatcctgaaggcggccaacgcggtgatcgccaac
aaccagggccggctgggcaaggagctctggaccgacggtccggaaggcgaaccgatcagc
ctgtacgcggcgttcaacgagcaggacgaagccaactacattgccgacagcatttctgcc
tgggtgcaggacggcaacctgcgcagtgaatccgcgattctctatcgctccaacgcccag
tcccgggtgctggaagaatcgctgatgcgccagggcattccttaccgggtatacggtggc
ctgcgattctatgatcgtcaggaaatccgcaacgccctggcatatctgcggttggtccag
tatcgccgcgacgatgcggcgtttgagcgggtggtgaacgtgccgccccgtggcattggc
gccaagagcctggcggagcttcgggaatacgcgaccgagcagagtatctcattgtgggaa
tccgccgagcgtctgctggaagccgggcaggttaaaggccgggccaaaaccgggctgcag
tctttcattgcgatcatcgaaggcctctccgacatggtgggcgatgcttcgttgcatggc
ctgatgaagcagaccatcgaaaacagcgggctgaaggactatcacgccagcgaaaaaggt
gagaaaggccaggcccgggtggagaacctcgaggaactggtcaatgcgttgtctgactat
gaggtggaggacggcgtggacgcgctgtcggaattcattgctcaggcggctctggatgcc
ggtgaatcccaggccgaggaccatgaggacagcgttcagttaatgaccctgcattccgcc
aagggtctggagttccccctggttttcctggcgggcgtggaagaggggctgttcccccac
ggcatgtccctggaagaacctggtcgcatggaagaggagcgccgcctggcctacgtgggc
atcacccgggccatgaaaaagctggtgcttacttacgccgaatcccggcgtttgtacggt
caggaaaagttcaatgcgttgtcgcggtttgtccgggagattccgggtgactgtctgctg
gaagtgcggctgcgcaacacagtgacccgccccgctatggtggcgcgtccgaatgagagc
atgttcagccaggattcggcccagcaatccggtttcagcctgggtcagcgggtgcgccat
cccaagtttggcgagggcatcgtgatgaattcggagggcaccgggcaccatactcgggtg
caggtgaactttgatgagggcgccaagtggcttgttctggcttatgcgcctctcgaggcc
tgctaa
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