Marinobacter flavimaris: ACGK9W_16755
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Entry
ACGK9W_16755 CDS
T10818
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mfli Marinobacter flavimaris
Pathway
mfli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mfli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACGK9W_16755 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfli03400
]
ACGK9W_16755 (recB)
Enzymes [BR:
mfli01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ACGK9W_16755 (recB)
DNA repair and recombination proteins [BR:
mfli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACGK9W_16755 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_25
AAA_11
Motif
Other DBs
NCBI-ProteinID:
XKQ60744
LinkDB
All DBs
Position
complement(3581313..3585035)
Genome browser
AA seq
1240 aa
AA seq
DB search
MTEQMTNRNPNLDPLALALNGSALIEASAGTGKTFTIAILYVRLVLGHGQSPDSPLQNLL
PPNLLVVTFTEAATKELRDRIRTRLTQAAEVFSDAPDEPNPPAETALIYQLRDESYPDPA
SWPECRKKLLLAAEWMDEAAVSTIHSFCNRMLSEHAFDSGSLFKLTLETDQSELLDEVAR
DYWRTFVYPLPPALMDEALSHWKTPGDLRQGVRNLIDDPLSLGTPPESVHKAIDQVVRRR
LEQSQSLKAHPWSQWRDDVIELLSDLNKSKRLHGASKNAMIKVWDLLVAWAESDDLLPEK
IDSAAGFKNQTPEGLDKILKGDDPAPHHPAFDAIGALLDFSQNQPNAKSDILRHASHWIA
ERLESEKQKRSEMGFDDLLTRLDDALHGPRGDQLAATIRRQFPVALIDEFQDTDPVQYRI
FDRIYDVAGSDSGTCLLMIGDPKQAIYGFRGADIYTYLQARQGVKERTYTLGKNFRSAKT
MVAAVNRVFEHSDQNSRDGAFLFGKGDTSPLPFQGVDANGTKRVWAINGEAQPSLVFWTH
ESGEEDRDGNPKGMAKGTATADVVETCASEIAQLLTLGQAGQAGFALHDNSENLEPVAPK
DIAILVNNRNEASAVRDALGQRRIKSVYLSDRDSVLTSRESQEMLCWLRAFAEPRQLAYI
RAALATPTLGQSWHAMNQLLTDELVLEREIERFIGYQQQWQKQGVLPMLRTFLMDFEVPG
RLLQRPDGERRLTDILHIAELLQQDSLQLDGEHALVHHYTQILRVADEEDEHRTLRLESD
AGLVKVITVHKSKGLEYPLVFLPFGTAFRAQSEKQAFVRYHNEQGRLVTVFDPSPDDVAR
ADRERLGEDIRKFYVALTRARFATWVGTAALDNWQQSGLGYLIGSEGQSRISDCLGKLAE
GRAEIRITPLPDPDDTHYHEPAPEALGPAMVSSREAREDWWIASYSSIEYTGMTGTGIAF
TGEVEDAQTQNLLEESTLDEEENPAQMANQRNQHNFPKGAGPGTFLHELLEWCTQQGFQR
VVDNPPLLHEQLTRRCGTRGWNEWVEPLVRWLLALISKPLSLDRAGAETVCLSDLTTLRP
ELEFWFESRNVSIRKLDQLVTAHTLNRADRPRVEETRFNGMLKGFIDLVFEHNGRYYVLD
YKSNTLGEDNSAYTDQAMGNAILDKRYDLQYVLYLLALHRLLKARLPDYDYDRHIGGAVY
LFLRGIDSSTGGAFTDKPPRALIEQLDALFDGESVAEVAA
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagcagatgaccaaccggaatccgaacctggatcccctggcactggccctcaac
ggcagtgctctgatcgaggccagtgccggcaccggcaaaacctttaccattgctattctg
tacgtacgcctggtgcttggccacggccagtcgcccgacagccctctgcagaacctgctg
cctcccaacctgctggtggtcacttttaccgaggccgccaccaaggaactgcgtgaccgt
atccgcacccggctcacccaggccgccgaggtgttttctgacgcgcccgacgagcccaat
ccacccgcggagacggcactgatctaccagctacgggatgaaagctacccggatccggcc
agctggccggaatgccgaaagaagctgctattggccgccgaatggatggacgaggcggcg
gtatcgaccatccacagtttctgcaaccgcatgctcagcgagcacgccttcgacagcggc
agcctgttcaaactcaccctcgaaaccgaccagagcgaattgctggacgaggtcgcccgg
gattactggcgcacctttgtctatcctctgccgccggcgctgatggacgaggccctgagc
cactggaaaacccccggggacctgcgccagggtgttcgcaatctgattgacgatcccctg
agcctgggcacacccccggagagcgttcataaagccatcgatcaggtggtccgccggcgt
ctggaacagtcacagtctctgaaagcccacccctggagccagtggcgcgatgacgtcatc
gagctgctgagcgatctgaacaagagcaagcgactccatggcgccagcaagaatgccatg
atcaaggtctgggatttgctggttgcctgggcggaatcggacgaccttttgcccgaaaag
atcgatagcgccgcgggcttcaagaatcagacgcccgaagggctcgacaagattctcaag
ggcgatgatcctgcccctcatcacccggcctttgatgccatcggagcgctgctggatttc
agccagaaccagcccaacgccaaatccgacattctgcgccacgccagccactggattgcc
gagcggctggagtcagaaaagcagaaacgctcggaaatgggctttgacgatctgctcacc
cggctggacgatgcgctgcacggcccccggggcgaccagctggccgcgacgatccgtcgc
cagtttcccgttgctctgattgacgaattccaggacaccgacccggtgcagtaccggatc
ttcgaccgcatctatgatgtggctggcagcgattccggtacctgcctgctgatgatcggg
gatcccaagcaggccatctacggctttcggggggccgatatctacacctacctgcaggcc
cggcagggtgtgaaagagcgcacctacacactgggtaaaaacttccgctccgccaaaacc
atggtggcggcggttaaccgggtctttgaacacagtgaccagaacagccgggacggcgcc
ttcctgttcggcaagggcgatacgtcaccgctgccgttccagggtgtggacgccaatggc
accaaacgagtctgggcgattaacggggaagcgcagcccagcctggtgttctggacccat
gaatccggggaagaggacagggatggcaatccgaaaggtatggccaagggcactgccacg
gccgatgtggtggaaacctgcgccagtgagatcgcccaattgctgaccctgggccaggcc
gggcaggcgggttttgctttgcacgataattcagagaatctggagccggttgcccccaaa
gacatcgcgatactggtcaacaaccgcaacgaggccagcgcagtgcgggacgccctgggc
cagcggcgtatcaagagtgtgtacctgtcagaccgcgattcggtgctgacctcccgggaa
tcacaggaaatgctctgctggcttcgggcatttgccgagccccggcagctggcctatatc
cgcgcggccctggctacacccaccctcggtcagtcctggcatgccatgaatcagctgctg
accgacgagctcgtgctggaacgggaaatcgagcgctttattggttaccagcagcaatgg
cagaaacagggtgtactgcccatgctgcgaaccttcctgatggatttcgaggtgccaggc
cggttactgcaacgccctgacggcgaacggcggttgaccgacattctgcacattgccgaa
ttgctgcagcaggacagcctgcaactggacggcgaacatgccctggtgcaccactacacc
cagattctgcgtgtagccgacgaggaagatgaacaccgtaccctgcggctggagagtgat
gccggcctggtgaaggtcatcaccgtgcacaagtccaagggcctggagtacccgctggtg
tttctgccctttggcacagcttttcgcgcccagagtgaaaagcaggccttcgtgcgctat
cacaatgagcagggcaggctggtcacggtattcgacccgtcgccggacgacgtggccagg
gctgaccgggagcgcctaggtgaggatatccgcaagttctacgtagccctgacccgggcc
cgcttcgccacctgggtcggcacggcggccctggacaactggcagcaaagcggactgggc
tacctgattggaagcgaagggcaaagccgtatcagcgactgcctggggaaactggcagag
ggcagagcagagatccggataaccccgttaccggatccggacgacacgcactaccacgaa
ccggcgccggaagcgcttggcccggccatggtctcttcccgcgaggccagagaggactgg
tggattgccagctactcctccatcgaatacaccggcatgaccggcaccgggatcgcgttt
accggtgaggtggaagatgcccagacccagaacctgctggaagaaagtaccctggacgaa
gaggaaaacccggctcaaatggccaaccagcgcaaccagcataacttcccgaaaggcgcc
ggacccggcaccttcctgcacgaattgctggaatggtgcacgcagcaggggttccagcgg
gttgtggataacccgccgctgcttcatgagcagctgacccggcgctgcggcactcgtggt
tggaacgaatgggtggagccgctggtgcgctggttgctggcattgatcagcaaaccattg
agcctcgaccgggccggtgcagaaaccgtctgcctgtcggacctgaccaccctgcgcccg
gaactggagttctggtttgaaagccgcaatgtcagtatccggaaactggaccagctggta
accgcgcacactctgaatcgcgcggaccgtccccgagtcgaagagacccgattcaacggg
atgctcaaggggtttatcgatctggtgttcgaacacaacgggcgctattacgtgctggac
tacaaatccaataccctgggcgaagacaacagcgcctataccgatcaggcaatgggcaac
gccatcctggataaacgctacgatctgcaatacgtgctctacctgctggccctgcaccgg
ctgcttaaagcccgtttgccggattacgactacgaccgacacattggcggcgcggtgtat
ctgttcctgcgaggcattgattccagcacaggtggcgccttcaccgacaaaccgcccaga
gccctgattgaacaactggatgccctgtttgatggcgagtcggttgcggaggtggccgca
tga
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