Marinobacter flavimaris: ACGK9W_21275
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Entry
ACGK9W_21275 CDS
T10818
Name
(GenBank) sigma-54-dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
mfli Marinobacter flavimaris
Pathway
mfli02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mfli00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACGK9W_21275
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
mfli02022
]
ACGK9W_21275
02035 Bacterial motility proteins [BR:
mfli02035
]
ACGK9W_21275
Two-component system [BR:
mfli02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
ACGK9W_21275
Bacterial motility proteins [BR:
mfli02035
]
Pilus system
Twitching motility proteins
ACGK9W_21275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
VpsR
AAA_16
HTH_30
HTH_50
AAA_5
AAA_19
nSTAND3
FleQ
HTH_28
Motif
Other DBs
NCBI-ProteinID:
XKQ61597
LinkDB
All DBs
Position
complement(4559796..4561187)
Genome browser
AA seq
463 aa
AA seq
DB search
MTTYTALIVDDEPDIRELLEITLTRMGISTLTAPDLTSARKLLEQNATHLCLTDMNLPDG
NGIELVQWIQKHSPATPVALITAYGNMDTAIESLKAGAFDFVSKPVELPRLRELVNSALK
LSEPKADAEDTADEPGLLLGKSPEIRKLRNQTRKLARSQAPVFISGESGSGKELVARMIH
LQGPRREGPFIAVNCGAIPSELMESEFFGHKKGSFTGAVENKDGLFRSANGGTLFLDEVA
DLPLAMQVKLLRAIQEKAVRPVGDTKEVPVDIRVLSATHKNLPELVQEGSFRQDLFYRIN
VIELAVPPLRERPDDISLLSNHILERIAKEYECDPASLTPAAVDRLRGYDFPGNVRELEN
VLERAFTLCDADQIDADDLHLGNGVQHAASASQIIAEGQANGEDGIAAVPDGEIDLEGYL
EGIERQAIEKALEATRWNKTAAAKRLGISFRALRYRLKKLGME
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaccacatacacagcgctgattgttgatgatgaaccggacatccgggagttactcgag
atcaccctcacccggatgggaatatcaaccctcacggcacccgacctcaccagcgcccgg
aaattgctggaacagaacgccacccacctctgcctgaccgacatgaacctgccagacggt
aatggcattgaactggtccagtggattcagaaacactctccggccacgcctgttgccttg
atcacagcgtacggcaacatggacaccgcgattgaatcgctcaaagccggggcttttgat
ttcgtgtccaaaccggtggagctgccccgactaagggaactggtcaatagcgccctcaag
ctatctgagcccaaggcagacgcggaagatacagccgacgagccaggcctgctactcggc
aaatcaccagagattcgaaaactccggaaccagacccgaaaactggcccgaagccaggcc
cccgtgtttatcagtggcgaatctggcagtggtaaagagctggtggcccgaatgatccac
ctccagggaccccgccgcgaaggaccgttcatcgcggttaactgcggtgcgattccctcg
gaactgatggaaagcgaattcttcggccacaagaaaggcagctttaccggggccgtggag
aacaaagacggcctgttccgctctgccaacggaggtaccctattccttgatgaagtggca
gacctgcccctggccatgcaggtgaaactgctccgcgccatacaggaaaaagccgttcgg
cccgtcggggacaccaaggaagtgcccgtcgacattcgggtactgagcgccacccacaag
aatctgccggagctggtccaggaaggcagctttcgtcaggatcttttctaccggattaac
gtgatcgaactcgcagtaccacccctgagagagcggccggatgatatttctctgctttcg
aatcacattcttgaacggattgcgaaagagtatgagtgtgaccctgcctcgttaacgcca
gcggccgtggacagactgcgaggctatgactttccgggcaatgtccgggaactggaaaac
gtcttggagcgggcttttaccctgtgcgacgccgatcagatcgatgctgatgatctgcat
ctggggaatggtgttcagcatgcagcttcggcctcgcagatcattgctgaagggcaagca
aacggggaagatggcattgcagcagtacccgatggtgaaatcgatctcgaaggatatctg
gaaggcatcgagcggcaagccattgagaaggcgcttgaggcaactcggtggaacaagacg
gcggcagcgaaacgattggggattagctttcgagcattgcggtataggttgaagaagttg
ggaatggaataa
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