Miscanthus floridulus: 136449477
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Entry
136449477 CDS
T10264
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mflo03000
]
136449477
03036 Chromosome and associated proteins [BR:
mflo03036
]
136449477
Transcription factors [BR:
mflo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
136449477
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
136449477
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
Rttp106-like_middle
SSrecog
HMG_box
HMG_box_2
HMG_WDHD1
HMG_box_5
CDC45
Nop14
YL1
Motif
Other DBs
NCBI-GeneID:
136449477
NCBI-ProteinID:
XP_066305619
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Position
5:complement(9634475..9640962)
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AA seq
639 aa
AA seq
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MTDGHHFNNILLGGRGGTNPGQFKVYSGGLAWKRQGGGKTIEIDKADVTAVTWMKVPRAY
QLGVRIKDGLFYRFIGFREQDVSSLTNFIQKNMGVTPDEKQLSVSGHNWGGIDIDGNMLT
FMVGSKQAFEVSLADVAQTQMQGKTDVLLELHVDDTTGANEKDSLMDLSFHVPTSNTQFV
GDENRPPAHILWETILKFADVGSSEEPVVTFDGIAILTPRGRYSVELHLSFLRLQGQAND
FKIQYSSIVRLFLLPKSNNPHTFVVITLDPPIRKGQTLYPHIVIQFETEAVVERDLALGK
ELLVDKYKDRLEESYKGLIHEVFTKVLRGLSGAKVTRPGSFRSCHDGYAVKSSLKAEDGL
LYPLEKGFFFLPKPPTLILHEEIEFVEFERHGAGGASISSHYFDLLVKLKNDQEHLFRNI
QRNEYHNLFNFITGKNIKIMNLGGDGQGASGVVTDVLRDTDDDAVDPHLERIKNQAGDDE
SDEEDEDFVADKDDSGSPTDDSGDEESDASDSGGEKEKSSKKEASSSKPVQKRKPKGRDD
EGHEKKKAKKKKDPNAPKRAMTPFMYFSMAERGNMKSSNPDLPTTEIAKKLGEMWQKMSS
EEKQPYIQQAQVDKKRYEKESAVYRGEATADVDSGNESD
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggccaccacttcaacaacatcctcctcggagggcgcggtggcacgaaccct
ggtcagtttaaagtgtattctggtggacttgcatggaagagacaaggtggaggaaagacc
attgagattgacaaagctgatgtaaccgcagttacttggatgaaagtccccagagcatat
cagcttggagtcaggattaaggatggcctgttctacagatttattggcttccgtgaacag
gatgtgagcagcttgaccaacttcatacaaaagaatatgggcgtcacaccagatgaaaaa
cagctttctgttagtggccacaactggggagggattgatatagatggaaacatgctaacc
tttatggttggttcaaagcaagcatttgaagtatccctagctgatgttgcacaaacccag
atgcaaggaaaaacagatgttctcttagagcttcatgttgatgatactactggagccaat
gagaaagactccctcatggatttaagttttcatgtgcctacttcgaatactcagtttgtt
ggggatgagaatcgccctccggctcacattttatgggagactatattgaaatttgctgat
gttggttcttctgaagaaccagttgtcacgtttgatggaattgcgattcttacaccaaga
ggacgttatagtgttgagcttcatctgtcatttctgcgactccaaggacaagctaatgat
ttcaaaatccaatacagcagcatcgttcgcctctttcttttgccaaagtcaaacaatcct
catacgtttgttgttattactcttgatccaccaatccgtaaaggacaaacattgtatcct
cacattgttattcagtttgagacagaggcagtagttgaaagagacctggcattgggtaaa
gagctgttggttgacaaatacaaggacaggcttgaggaatcttacaagggtctaatacat
gaggtatttaccaaagtccttcgtggtctatctggtgctaaagtcacaaggccaggttct
ttcagaagttgccatgatggatatgcagttaaatcatcactcaaagctgaagatggactg
ttgtatccacttgaaaagggtttcttcttcctgccaaagccacctacactcattcttcat
gaggagattgagtttgttgaatttgaacgccatggtgctgggggtgccagtatatcatct
cactattttgacctccttgtcaaactgaaaaatgaccaagagcatctcttcagaaatatt
caaaggaatgagtaccacaacctcttcaacttcatcactggaaagaacattaaaataatg
aaccttggaggagatggtcaaggtgcaagtggtgtagttacagatgttctacgagacact
gatgatgatgctgttgatccacatctagaacgtattaagaatcaggctggggatgatgaa
agtgatgaagaggatgaagattttgttgcggataaggatgatagtggatctcctactgat
gactcgggtgatgaggaatcagatgctagtgatagtggtggtgaaaaagagaaatcatcc
aagaaggaagcaagcagttcaaagccagttcagaaaaggaagcctaagggcagggatgac
gaaggacatgagaagaaaaaggcaaagaagaaaaaagatcctaatgcccccaaaagagca
atgacaccgttcatgtatttctcaatggctgagcgaggaaacatgaagagcagcaaccca
gatttgcctacgactgagattgcaaagaagcttggggagatgtggcaaaagatgtcaagc
gaagagaagcagccttacatccagcaggcccaggtcgacaagaaacgttatgaaaaagag
tccgccgtctatcgtggtgaagctacagctgatgtggattctggcaacgagtctgactag
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