Miscanthus floridulus: 136449521
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Entry
136449521 CDS
T10264
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1-like
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
mflo01003
]
136449521
Enzymes [BR:
mflo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
136449521
Glycosyltransferases [BR:
mflo01003
]
Polysaccharide
Structural polysaccharide
136449521
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
136449521
NCBI-ProteinID:
XP_066305658
LinkDB
All DBs
Position
5:complement(12489068..12493254)
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AA seq
491 aa
AA seq
DB search
MVAVGGGGGGRRRRAWRWAMRAVASAVVWTAVVQVASIAGLFRPWVVADCGGGGKGGGAA
AAGLAALAGEDGLAARLSPPALVPKRIYKSNGYLLVTCNGGLNQMRAGICDMVTIARHLN
LTLVVPELDKRSFWADPSDFGDIFDVDHFINSLRDELMIVKELPLKLQLRTKKRLYSMPP
VSWSNETYYLKRILPLARKHKVIHFEKSDARLANNGLPIQLQMLRCRVNFEALRFTPQIE
ALGRKLMSTLQRSGQFVVLHLRYEMDMLSFSGCTHGCSSKETEELTRMRYAYPWWKEKEI
DSEVKRLQGLCPLTPEEITLVLKALGFTKDTLIYIASGEIYGGERRLAVLKDAYPKLVRK
EKILSPDELRPFQNHSTQMAALDYMVSLASDIFIPSYDGNMARVVEGHRRYMGFRKTIVL
DRKKLVELLDLFQGGALSWDEFSDAVKEAHKSRMGQPTERKVILGQPKEEDYFYANPQEC
LGSNGGLRDIS
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggtggccgtcggcggcggcggcggggggcggcggaggcgggcgtggcggtgggccatg
cgggcggtggctagcgccgtcgtgtggaccgcggtcgtgcaggtcgcctccatcgccggg
ctgttccgcccgtgggtcgtcgccgactgcggcggcggcgggaaaggcggcggcgccgcc
gcggccgggctcgccgcgctcgccggcgaggacggcctcgcggcgaggctgtcgccgccg
gcgctcgtgcccaagagaatttacaaaagcaatggctacctactggtgacatgcaatggc
ggactcaatcaaatgcgagccgggatatgtgatatggtgactatagcgcgccatctgaat
ctaacacttgtggtccctgaactggataaaaggtcgttttgggctgacccaagtgatttt
ggagatattttcgacgtggaccacttcattaattccttgagagatgagctgatgatagtt
aaagagctgcctttaaaactccagttaagaactaagaagagactgtactcgatgcctcct
gtcagttggtcgaatgaaacatactacctaaagcggatattacctcttgcaaggaagcac
aaagtaatccattttgagaaatcggacgctcgccttgcaaacaatggccttcctattcag
ctccagatgctgcgttgccgtgtaaactttgaggctttgagattcaccccacagatcgaa
gcccttggcagaaagcttatgtccaccctccagagaagtggacaatttgttgtgcttcac
ttgcgctatgagatggacatgctctccttttcaggctgcacacatggctgctctagtaaa
gaaactgaggagctcactagaatgagatatgcttatccatggtggaaagaaaaagagatc
gattctgaagtgaagaggcttcagggactttgccccctcacaccagaggaaattactcta
gtgcttaaagctctagggttcacaaaggatacgctgatatacattgcttctggtgaaatc
tatggtggtgaaaggcgcttggcggtgctcaaggatgcgtaccctaaactagtaaggaag
gagaaaattttatctcctgatgaattgcgaccattccagaaccattcaacccagatggca
gcactggattacatggtttctctagcaagcgatattttcattcccagctatgatggaaat
atggcaagggttgttgaaggtcaccgcaggtatatgggttttcgcaagaccattgttttg
gacagaaagaagcttgttgagctcttggaccttttccaaggaggtgctctatcttgggac
gaattctcagatgcagtgaaggaggcacacaagagccgcatggggcaacctacagaaaga
aaggtcatccttggccagcctaaggaagaggactatttctatgctaatcctcaagaatgc
cttggctccaacggaggactaagagacatttcctga
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