Miscanthus floridulus: 136449563
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Entry
136449563 CDS
T10264
Name
(RefSeq) transcription initiation factor TFIID subunit 15b-like
KO
K13098
RNA-binding protein FUS
Organism
mflo Miscanthus floridulus
Pathway
mflo03015
mRNA surveillance pathway
mflo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136449563
09122 Translation
03015 mRNA surveillance pathway
136449563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mflo03041
]
136449563
Spliceosome [BR:
mflo03041
]
Complex A
Other components
Complex A specific factors
136449563
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
136449563
NCBI-ProteinID:
XP_066305714
LinkDB
All DBs
Position
5:complement(14382540..14386481)
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AA seq
493 aa
AA seq
DB search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NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggtcttacggatccgacgactaccgcggcggtggcggcggcggcggatacggt
ggccgaggtggcggcggcggcggcggccgtgggcgcggaggcggtggagaagggtatgga
ggtggcggcgcgggaggaggatatggaggtggtggtggtggaggctacggcggtggcggc
ggaggcggccgaggcggcggcggcggcgggttcggtggcggaggacgaggtggcggtggt
ggtggaggtggccgaggcggtggcgggcgcgggggtggacgcgaaggcgactgggtttgc
cctgacgcaagttgtggcaatgtgaacttcgcaaggaggactgaatgcaataagtgtgga
gcaccatgcccaagtggaggtggcggcagtgggggtgggggctataataggtctggtgga
ggtggtgggggctacaacaaccgtggcagtggtgattatggttctggaggaggtggtggt
ttcgacagagatggcggagactacaattctggtgggcgtggtggtggaggtgggggcaga
ggaggatacaatcgaagtggtggtagtgaccgtggttttgatgaccaccgtggtgacaga
ggtggcacctatgggggacgagatcaggagaacaaaaggggtagtgaaggtggctacaat
gccggtggctatggacaagctcctccacaaggtcctccttcctatggtggtcctgtgggt
gactatgcagcgcctcctagctcctatggaggcaacaatgcttatggttcagattctgca
gtgccgcctcctaatagctacagtggtggcccgggctcatacccaccaagctatggtgcc
ccgcctccacaccaatatggtggtgccccaggggggcaagggggtctgcctcctacatat
gatggtggatatggtggtcggtccatgcctgggggtggaggatctgggggtgcaccgcca
ccttatcatggcggcggtggcggcggcggttatactggtagtgctgaccctgaaccagct
ggaaaagttaagcagtgtgatgaaaattgtgacgagacatgtgacaatgcaaggatttac
atctcaaatttgcctcctgatgtcactgttgaggaattacaggagctatttggaggaatc
ggccaggttggaaggatcaagcaaaaacgtggttacaaagatcagtggccctggaacata
aaaatatatactgatgactctggaaaagccaaaggagacgcttgccttgcttatgaagat
ccttctgctgctcactcagctggtggattttacaataattatgacatgagaggctacaaa
atcagcgttgtgatggctgagaaatcagcacccagagcagcaccctcttatgggcatggt
ggtggccgcggtggtggtggacgcagggataattacagagatggtgggggccatggaccc
aatagaaaccagggtggtggttcgcggtcacggccatactga
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