Miscanthus floridulus: 136449982
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Entry
136449982 CDS
T10264
Name
(RefSeq) probable chromatin-remodeling complex ATPase chain
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
mflo Miscanthus floridulus
Pathway
mflo03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
mflo03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
136449982
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
136449982
RSF complex
136449982
WICH complex
136449982
B-WICH complex
136449982
NORC complex
136449982
BRF complex
136449982
NuRF complex (fruit fly)
136449982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136449982
NCBI-ProteinID:
XP_066306324
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Position
5:54316408..54335539
Genome browser
AA seq
1104 aa
AA seq
DB search
MAKPVTYDEEEEISSSAEEEEDQSDAAGSGSGEEGDEEEEEDAAPPAEEEEAAGEGQEEE
VDEEEIEAVTTGAGAEDEEDAGADAAAEVDDESQSTEDDESVARDKDDGDETDAVVGKRE
KARLKELQKMKKQKIQEILDTQNAAIDADMNNKGKGRLKYLLQQTEIFAHFAKGSQSNEK
KPRGRGRHASKMTEEEEDEEYLKEEEDALAGAGGTRLLTRPACIKGKMRDYQLAGLNWLI
RLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWIKEIQRFC
PIIRAVKFLGNPEERNHIRDNLLQPGKFDVCVTSFEMAIKEKSTLRRFSWRYIIIDEAHR
IKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWALLNFLLPEIFSSAETFDEWFQIS
GENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDL
EVINAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGEHLVENAGKMVLLDKLLPK
LKERDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFNRPGSEKFV
FLLSTRAGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIE
EKVIERAYKKLALDALVIQQGRLAEQKTVNKDDLLQMVRFGAEMVFSSKDSTITDEDIDR
IIAKGEETTAELDAKMKKFTEDAIKFKMDDNAELYDFDDEKDENKVDFKKLVSDNWIEPP
RRERKRNYSESDYFKQALRQGAPAKPREPRIPRMPHLHDFQFFNNQRLNELYEKEVWYLM
QANQKKDTIDGEDEDQLEPLTAEEQEEKERLLEEGFASWTRRDFNTFIRACEKYGRNDIK
SISSEMEGKTEEEVQRYAKVFKERYKELSDYDRIIKNIERGEARISRKDEIMKAIGKKLD
RYKNPWLELKIQYGQNKGKFYNEECDRFMLCMVHKLGYGNWDELKAAFRMSPLFRFDWFV
KSRTTQELARRCDTLIRLVEKENQEYDEQERQARKEKRLAKNMTPTKRAALRNSEGDNTP
LSSFKRRRQSLMDDYVGSGRRKRG
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagccggtgacgtacgatgaggaggaggagatctcgtcctccgccgaggaggag
gaggaccagtccgacgccgccggctccggatctggcgaggaaggggatgaggaggaggag
gaggatgcggcaccgcccgcggaggaggaggaagctgcgggcgaggggcaggaggaggag
gtagacgaggaggagatcgaagccgtcactaccggcgctggagctgaggacgaggaggac
gccggtgccgatgccgccgctgaagtcgacgacgagtcccagtccaccgaggacgacgag
tccgttgccagggataaggacgatggcgacgagactgatgcagtggttgggaagcgtgag
aaagcaaggctaaaagaactccagaagatgaagaagcagaaaatccaagaaatactagat
actcaaaatgctgccattgatgctgacatgaacaataaagggaagggacggttgaaatac
cttcttcagcagacagaaatatttgctcactttgcaaaaggaagtcagtcgaacgagaaa
aagccacgcgggaggggacgtcatgcatcaaagatgactgaagaagaggaagacgaagag
tacctcaaagaggaagaagatgcccttgccggtgcagggggaacacgtttactgacaagg
cccgcctgcatcaaaggaaagatgcgtgattatcaactggctggacttaattggcttata
cgattgtatgagaatggtatcaatggaatattagctgatgagatgggtcttgggaaaacg
cttcaaactatttcattgctgggatatctgcatgagttcagaggtataactggtcctcac
atggttgttgcgccaaagtccactcttggcaactggattaaggaaatccaacgtttttgc
cctatcatacgggctgtgaagtttttggggaatccagaagagcggaaccatataagggac
aatttgctacagcctggaaaatttgatgtgtgcgtgactagtttcgaaatggcaatcaaa
gaaaaatctacattgaggcgcttcagctggcgctacataattattgatgaagctcaccgg
ataaaaaatgagaattctcttctatcgaagactatgaggatttacaacactaattatcgt
ctcctcatcacaggcactccactccaaaataatctccatgagctctgggctctcctcaat
ttcttgctacctgaaatatttagctctgcggagacctttgatgaatggtttcaaatttct
ggggaaaatgatcaacaggaggtggtccagcagcttcataaggttcttcgcccatttctt
cttaggaggctcaagtctgatgtagaaaagggtctacctccaaagaaggaaaccatactt
aaagttggaatgtctcagatgcagaagcagtactatcgtgctctgcttcagaaggatttg
gaggttattaatgctggtggtgagcgcaagcgattgcttaacattgccatgcagttgcgc
aagtgctgcaaccatccatatttattccaaggagctgaacctggcccaccctacacaact
ggtgaacatctagttgagaatgcaggaaaaatggttctattagataaattgctgcccaag
ctaaaggagcgtgattccagagtcctaattttttcacagatgaccaggcttttggatatc
ttggaagattatcttatgtatagaggatatcagtattgccgaattgatggaaatacaggt
ggagaagatcgtgatgcatccattgaagccttcaataggccaggaagtgagaagtttgtt
ttcttactttcaactagggcaggtggccttggtattaacttggccactgctgatgttgtg
gttctttatgacagtgattggaatccacaagcggatctgcaagctcaggaccgtgcacat
agaataggtcaaaagaaagaagttcaagtgttccgcttttgcactgagtacactatcgag
gaaaaggtgattgagagagcatataagaagctagcattggatgctttggttattcagcaa
ggacgattggcagagcagaaaactgtcaataaggatgaccttctgcaaatggtgcggttt
ggtgctgaaatggttttcagttctaaggacagcacaataactgatgaggacattgaccgc
attatagctaaaggagaggagacaacagcagaacttgatgcgaaaatgaaaaagttcact
gaggatgccattaaatttaagatggatgataatgctgaattgtatgattttgatgatgag
aaggatgaaaacaaggttgatttcaagaaacttgttagtgacaactggatcgagccacct
agaagagaaaggaagagaaactactctgagtctgactactttaagcaagcacttcgccaa
ggtgcaccagcaaagccaagggagccaaggattccaagaatgccccacttgcatgatttc
cagtttttcaataaccaaaggctaaatgaattgtatgaaaaggaagtgtggtaccttatg
caagcaaaccagaagaaagataccattgatggcgaagacgaagatcagttggagcctttg
acagcagaggagcaggaagagaaggaacggttattagaagagggttttgcatcatggaca
aggagagacttcaacacatttattcgtgcatgtgagaaatatggtcgcaatgatattaaa
agtatatcctctgaaatggagggtaagacagaagaggaagttcaacgttatgctaaagtt
ttcaaggagagatacaaagaactgagtgattatgatagaattataaaaaatattgaaagg
ggggaagcaaggatatcccgcaaggatgagattatgaaggccattgggaagaagctagac
cgctacaaaaacccatggttagagttgaaaattcagtatggccaaaataaagggaagttc
tataatgaggaatgtgaccgctttatgctttgcatggtgcacaaacttggatatggaaac
tgggatgaactgaaagctgccttccgtatgtctcccttgttccgatttgattggtttgtg
aagtccagaactacccaagagttggctaggcggtgtgatacccttatccgactggttgag
aaagaaaatcaagaatatgatgagcaagagaggcaggcaaggaaggagaaaaggcttgct
aagaacatgactccaacaaagcgagcagcactaaggaattcagaaggtgataatactcca
ttgagttcattcaagaggcgacggcagtcccttatggacgattatgtgggctcgggaagg
cgaaagagagggtga
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