Miscanthus floridulus: 136449996
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Entry
136449996 CDS
T10264
Name
(RefSeq) pre-mRNA-processing protein 40A-like isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
mflo Miscanthus floridulus
Pathway
mflo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136449996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mflo03041
]
136449996
Spliceosome [BR:
mflo03041
]
Complex A
U1 snRNP components
U1 related factors
136449996
Complex B
136449996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
Motif
Other DBs
NCBI-GeneID:
136449996
NCBI-ProteinID:
XP_066306344
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All DBs
Position
5:59337298..59359392
Genome browser
AA seq
993 aa
AA seq
DB search
MASNMQAPGPPQPPRPPMMGSSAQPQNLGPPMPMQFRSVVPSQQPPQFMPPAAQQFRPVG
QPMPGANIGMPGQMPHFPQTGQHLPHSNQVPPASQGVPMVYQPARPMSSAPMQPQQQTAY
PGGHLPSMGAPMQPPTYTYQPTSIPPVVQPWGTGPGQNVPHVPPLVQSGHQPVSAPTTLP
SVNLSEPSSSDWQEHTAAEGKKYYYNKKTRQSSWEKPVELMTPLERADASTEWKEFTTPE
GRKYYFNKVTKQSKWTIPDELKVARELAEKASNQQPDRESGIAASALVGSAASEPSTIPA
NQPSSAVGIIAPSSHDGSSNSVPPGAAPSHNVDNTSSSIVGMQNGGPSTAVVPVATSTEV
PLVATDAGASRNNNENSSLTTGADTEDGTSAEDLEEAKKTMPIAGKINVTPLEEKTSEEE
PVVYATKMEAKNAFKSLLESVNVESDWTWDQTMRVIINDKRYGALKTLGERKQAFNEYLN
QRKKFEAEEKRVKQRKARDDFLAMLEECKELTSLTRWSKAILMFEDDERFKAVERPRERE
DLFENYLVELHKKEKAKAAEEHKRYVTEYRAFLESCDFIKATTQWRKVQERLEDDERYSR
LEKIDRLDIFQEYIRHLEKEEEEQKRIQKDQVRRQERKNRDGFRKMLEEHVADGTLNART
RWRDYCSQIKDSESYLAVASNTSGSTPKELFDDVIEELDKQYQEDKTQIKEVVKSGKVPM
TTSWTLEEFQTAILEDDALKGISTINVKLIYDDQLERLREKEQKEAKKRQRLGENFSDLL
YSIKEISASSTWDDSKQLFEDSQEFRALDSEAYARELFEECVVHLKERLKEKERLREEEK
AKREKEREEKEKKKEKEKERKDKERKEKERDHREKEREKEKGKDRSRRDEELDGADLDTH
GTKDKKRDKDKEKKHKRRHHDTDDVSSERDDKDDAKKSRRHSSDRKKSRKHAHGSDSDSE
NRHKRHKKDRDSSRRNGGHELEDGELGEDGEVH
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggctagtaatatgcaggctcctgggccgcctcagcctcccaggcctcccatgatgggt
tctagtgcccagccacaaaatcttggaccaccaatgcctatgcagtttaggtcagtggtt
ccttcgcagcagcctcctcagttcatgccgccagcagcacagcagtttcgtcctgttggt
cagcctatgccgggggctaacattggcatgcctgggcaaatgccacattttccacaaact
gggcagcacttgcctcactcaaatcaagttccacctgcatcacaaggggttcccatggta
tatcagccagctagaccaatgtcatcagcgcctatgcagccgcagcaacaaactgcgtat
cctgggggccatttgcccagcatgggtgcccctatgcaacccccgacctatacatatcaa
ccaacatcgattcctcctgtagtgcaaccctggggtacaggcccaggacagaatgtacct
catgtgcctcctctagtgcagtctgggcaccagccggtgtcagctccaacaactttgcct
tcagtcaacttgtctgaacctagctcttcagactggcaggagcacactgcagccgagggg
aaaaagtactactataataagaagacaaggcaatcaagttgggagaaaccagttgagttg
atgacacctttggagagggctgatgcctcaaccgaatggaaagaatttactacaccagaa
ggacgaaagtactatttcaacaaagtgaccaagcaatcaaaatggactattcctgatgag
ttaaaggttgcacgtgaattggcagagaaggcatcaaatcaacaacctgatcgagaatca
ggaatagctgctagtgctcttgtcggatctgctgcctctgaaccttctactatacctgct
aatcagccttcatctgctgttggtataattgctcccagctcacatgatgggtcatcaaac
tctgttcctcctggtgctgccccgtcgcacaatgtggataacacttccagttcaattgtt
ggcatgcaaaatggtggtccaagtactgctgttgttcctgttgcaacaagcacagaagtt
ccattagttgcaacagatgcaggggccagcagaaacaacaatgaaaattcatctctgacc
actggggctgacacagaggatggtacatccgctgaagatttggaggaggccaaaaagacc
atgccaattgcagggaagattaatgtcactccactggaggagaaaacaagtgaagaagaa
cctgtagtctatgccactaagatggaagcaaaaaatgcgttcaagtccttgctcgagtca
gtaaatgttgagtctgattggacatgggatcagactatgagagtcatcataaatgacaaa
agatatggtgctttgaaaactcttggagagagaaagcaagctttcaacgagtacttgaac
cagcgcaaaaaattcgaagccgaagaaaaacgtgtcaaacagaggaaagcacgtgatgat
ttccttgcaatgctggaagaatgcaaggagctcacatcattgacaagatggagcaaagca
atacttatgtttgaagacgatgaaaggttcaaagcagttgagcgtccaagggagcgtgaa
gatttatttgagaactatcttgtggaactgcataagaaggaaaaagccaaggctgctgaa
gaacacaaaagatatgtaacagaatacagagcttttctagaatcatgtgacttcatcaag
gcaactactcagtggagaaaagttcaggaacgtctggaagatgatgaacgctattcccga
cttgagaagatcgatcgcttggatatttttcaagagtacatacggcacctggagaaagaa
gaggaagagcagaagcggatacaaaaggatcaagtgagaagacaagagaggaaaaaccgt
gatgggttccgtaaaatgttggaagaacatgtcgctgatggtacacttaacgcaagaact
cggtggcgtgattactgttcacagataaaagattcagagtcttacttggctgtagcctca
aacacatctggctccacaccgaaagagctatttgatgacgtgatcgaggaacttgacaaa
cagtatcaagaagacaagacccaaatcaaagaagtggtgaaatctggaaaggttcctatg
acaacttcgtggacattagaggaattccaaactgctattctggaggatgatgctcttaaa
ggaatatcaaccatcaacgtcaagcttatctatgatgatcagcttgaaaggctcagggaa
aaagagcaaaaagaggctaagaagcgccagcggttgggggaaaatttttcagatcttctg
tattcaatcaaggaaatatcagcttcttcaacctgggatgattctaaacagcttttcgag
gatagccaagagttcagggccttggacagtgaggcttatgctagagagctttttgaagag
tgtgttgtccacctgaaagaaaggttaaaagagaaagaacgtttgagggaggaagaaaag
gcaaaaagagagaaagaacgcgaggagaaagagaagaagaaagagaaagagaaagaaagg
aaggacaaagaacgcaaagaaaaagaaagagaccaccgggagaaggagagagaaaaggaa
aaagggaaggatcgatcaaggagagatgaagagcttgatggtgctgatttggacacccat
ggtacaaaagataagaaaagagataaagataaagaaaagaaacataagagacgccaccat
gacacagatgatgtaagctctgaaagggatgataaagatgatgctaagaagtctcggagg
catagcagtgatcgcaagaaatctaggaagcatgcacatggttcagactcggatagtgaa
aaccggcacaaaagacataaaaaggaccgagatagtagcagaagaaatggtggacatgag
ctggaagatggtgaacttggagaagatggagaggtccattag
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