Miscanthus floridulus: 136450088
Help
Entry
136450088 CDS
T10264
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
mflo Miscanthus floridulus
Pathway
mflo03015
mRNA surveillance pathway
mflo04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
136450088
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
136450088
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mflo01009
]
136450088
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136450088
03036 Chromosome and associated proteins [BR:
mflo03036
]
136450088
Protein phosphatases and associated proteins [BR:
mflo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
136450088
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
136450088
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
136450088
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Me-amine-dh_H
Motif
Other DBs
NCBI-GeneID:
136450088
NCBI-ProteinID:
XP_066306465
LinkDB
All DBs
Position
5:75341259..75348801
Genome browser
AA seq
513 aa
AA seq
DB search
MNGAAAPERSPSASPPPAAQAQAPPPPSPTQPLEWRFSQVFGERSAGEEVQDVDIISAIE
FNKSGHHLATGDRGGRVVLFERTDVKDHACRKDAEKADYSISRHPEFRYKTEFQSHEPEF
DYLKSLEIEEKINQIKWCQAANGALFLLSTNDKTIKFWKVQEKKVKKVSEMNLDRSSTPA
NGSPGGVGYLSPSLSNGNALKPGGLPLLRLPVVVTSQETSLAVSCRRVYAHAHDYHINSI
SNNSDGETFISADDLRINLWNLEISNQSFNIIDVKPTNMEDLTEVITSAEFHPTHCNTLA
YSSSKGSIRLVDLRQSALCDTHSQIFEQHEAPGSRSFFTEIIASISDIKFSKDGRHILSR
DYMTLKLWDVKMNSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCQSGDGLRVATGSYS
NIFRVFGCGTGSSEATTLEATRNPTRRQLQNPTRATRSLSTLTRAVRRGGESTGIDANGN
SYDLSTKLLHLAWHPSENLIACAAANSLYMYYA
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcgctgcggcaccggagcgctcgccctcagcctcgcccccgcctgcggcccag
gcacaggcgccgccgccgccctccccgactcagccgctcgagtggaggttctcgcaggtg
ttcggcgagcgcagcgccggggaggaagtccaggatgttgacatcatctcagcaatagaa
ttcaataaatcaggacatcatcttgccactggagacagaggtggacgagttgttttattt
gaaaggaccgatgtcaaagatcatgcctgtagaaaagatgctgagaaagctgattattct
atcagcaggcatcccgaatttcgctacaaaactgagtttcaaagccacgaaccagagttt
gattaccttaagagcttggaaattgaagagaagattaaccaaataaagtggtgtcaagca
gcaaacggtgcattgtttcttctatccacaaatgacaaaacaataaagttttggaaggtc
caagaaaagaaggtaaaaaaggtatctgagatgaatttggaccgttcaagtactcctgca
aatggtagtcctggtggcgtgggctatctgagcccatctctctcaaatggcaatgctcta
aaacctggcgggcttcctttgcttcgcctgcctgtggtagttacaagccaagaaacaagt
cttgccgtgagctgccgaagagtatatgctcatgcacatgactaccatataaattcgata
tcaaataacagcgatggtgagacatttatatcagctgatgatttgcggataaatctctgg
aatttggaaatcagcaatcaaagtttcaatattattgatgttaagcctacaaacatggaa
gatctcactgaggtgataacatctgctgaattccatcctactcattgcaatacattggcg
tatagtagctctaagggctccattcgacttgttgatctgcggcaatcagccctttgcgac
actcattcccaaatctttgagcagcatgaggccccaggttcaagatcatttttcacagag
attatagcttcaatttcggacataaagttttcgaaggatgggagacatattctcagtcgc
gattacatgactctgaagctttgggatgttaagatgaattctggtccagttgcaacattc
caggttcatgagtatctaaggcctaagttatgcgatttatatgaaaatgactcaattttt
gacaaatttgagtgttgtcaaagtggtgatggattaagagtagcaactggttcctacagc
aacattttccgtgtgtttggttgcggtactggtagcagtgaggcaacaacacttgaagca
actcgaaaccctacaaggaggcagctccagaatcccactagagctaccagatccctaagt
actctgacaagggcagttagacgaggtggagaaagcactggaatagatgccaatggaaat
tcctatgatctgagcacaaagttgctccatttggcttggcacccatctgaaaacctaatt
gcgtgtgctgcagccaatagcttgtacatgtactacgcataa
DBGET
integrated database retrieval system
