Miscanthus floridulus: 136450211
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Entry
136450211 CDS
T10264
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 10-like
KO
K14777
ATP-dependent RNA helicase DDX47/RRP3 [EC:
5.6.2.7
]
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mflo03009
]
136450211
03029 Mitochondrial biogenesis [BR:
mflo03029
]
136450211
Enzymes [BR:
mflo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
136450211
Ribosome biogenesis [BR:
mflo03009
]
Eukaryotic type
90S particles
Helicases
136450211
Mitochondrial biogenesis [BR:
mflo03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
136450211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ERCC3_RAD25_C
ResIII
AAA_22
DUF2399
Cas3-like_C_2
AAA_19
Motif
Other DBs
NCBI-GeneID:
136450211
NCBI-ProteinID:
XP_066306676
LinkDB
All DBs
Position
1:complement(200523500..200528723)
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AA seq
454 aa
AA seq
DB search
MANGDAAVEAVGNGKEEPAARQASTFAELGICAELVEACDAMGWKEPTRIQAEAIPHALQ
GKDLIALAQTGSGKTGAFALPILQELLSNRQAEQSFFACVLSPTRELAIQIAEQFEALGS
AIGLRCSVLVGGVDRVQQVLSIGKRPHIVVGTPGRLLDHLTETKGFSLKKIKYLVLDEAD
KLLNVEFEKSLDDILREIPKDRRTFLFSATMTKKVNKLQRACLRNPAKVEAASKYSTVDS
LKQEFYFVPADDKDCYLLHVLNERQDSMIMVFVRTCESTRLLALMLRNLGLKAMSISGQM
SQDKRLGALNRFKAKDCNILICTDVASRGLDIQGVDMVINYDIPMNSKDYVHRVGRTARA
GRSGYAVSLVNQYEAQWFVLIEKLLGMQIDQRKVDRDEVMILKGPISDAKRIALTKFKDS
GGHKKRRKVGDDDEEVEDHSHSKRPKSFKKSNRR
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacggggacgcggccgtggaggccgtcgggaacgggaaggaggagccggcggct
cgccaggcttcgacgttcgcggagctgggtatctgcgcggagctagtggaggcgtgcgac
gccatggggtggaaggagcccaccaggattcaggccgaggccatcccccacgcgctccaa
gggaaggacctgatagcgctggcgcagacggggtccgggaagacgggcgcgttcgcgctg
cccatcctgcaggagctgctcagcaaccggcaggccgagcagtctttcttcgcttgcgtg
ctctcgccaacgagagaactggcgattcagatcgcggagcagtttgaggcgctcggatca
gctattggtttgcgttgctcagtgcttgttggaggagtggatcgggtgcaacaagtgtta
tccattggaaaacgtccgcacattgtggttggaactcctggccgtcttttggaccatttg
acagagactaaaggttttagtcttaagaaaatcaagtatttggtattggatgaagccgat
aagttacttaatgtggagtttgagaaatccctcgatgacattctgagagagatccctaaa
gacaggaggactttccttttctcagcgactatgaccaaaaaggtaaataagctgcaacgt
gcttgcctcaggaatcctgctaaggttgaagcggcctccaaatattctacagtagattca
cttaaacaagagttctattttgttcctgcagatgacaaggattgctatcttcttcatgtt
ctgaatgagaggcaagacagcatgatcatggtctttgtgcgcacatgtgaatctactagg
ctccttgctcttatgctgaggaatcttggtttgaaagctatgtctatcagtggccagatg
agtcaggacaagagactaggtgctttgaacaggttcaaagcgaaagattgcaatatcctt
atttgcactgatgtagcaagtcgtggccttgacattcaaggagttgatatggtcatcaat
tatgatattccaatgaattctaaggattatgttcatcgggtgggtaggaccgcacgtgca
gggcggtcaggatatgctgtatctttggtgaatcaatatgaagcccagtggttcgtgctg
atcgagaagctccttggcatgcaaattgaccagcgtaaggtggacagagatgaagtcatg
atacttaaagggcccatatccgatgcaaagagaattgcacttacgaaatttaaggattcc
ggcggccacaagaagcggagaaaggtgggagatgacgacgaagaggtggaagatcattct
cattctaagagaccgaaatccttcaagaaatcaaacagacgatga
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