Miscanthus floridulus: 136450245
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Entry
136450245 CDS
T10264
Name
(RefSeq) long chain acyl-CoA synthetase 4-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mflo Miscanthus floridulus
Pathway
mflo00061
Fatty acid biosynthesis
mflo00071
Fatty acid degradation
mflo01100
Metabolic pathways
mflo01212
Fatty acid metabolism
mflo04146
Peroxisome
Module
mflo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
136450245
00071 Fatty acid degradation
136450245
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
136450245
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mflo01004
]
136450245
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mflo04147
]
136450245
Enzymes [BR:
mflo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
136450245
Lipid biosynthesis proteins [BR:
mflo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
136450245
Exosome [BR:
mflo04147
]
Exosomal proteins
Exosomal proteins of breast milk
136450245
Exosomal proteins of breast cancer cells
136450245
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
136450245
NCBI-ProteinID:
XP_066306719
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Position
5:93267099..93274587
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AA seq
655 aa
AA seq
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MQNVAEVEPGRPAADGRPAVGPTYRSAFARDGFPPPVPGMDSCYDIFRMAVEKYPNNRML
GHREIVDGKAGAYVWKTYKEVFDIANKIGNSIRSCGLAKGSRCGIYGANCPEWIITMEAC
NAHGIYCVPLYDTLGAGAVEFILCHAEVEIVFAEEKKIELLVKTLPKSNEFLKTIVSFSK
VTQEQKEEVRKYGLSVYSWDEFLSLAADQEFDLPVKEKSDICTIMYTSGTTGDPKGVLIS
NASIICLIAGVDRLLSSQNEELAESDVYMSYLPLAHIFDRVVEELFIFHGASIGFWRGDV
KLLVEDIGVLKPTIMCAVPRVLDRIFSGLQAKISSGGFLKSTLFNVAYKFKHFRMMRGAK
HNEAASICDKVVFSKVKEGLGGNVRVILSGAAPLATHVEEYLRVVTCAHVLQGYGLTETC
AGSFVSLPNQMSMIGTVGPPVPNIDVRLESVPEMDYDALASTPRGEICIRGETLFSGYYK
REDLTKEVLIDGWFHTGDIGEWQPDGCMKIIDRKKNIFKLSQGEYVAVENLENVYGLVSA
LDSIWVYGNSFESFLVAVVNPNKEALESWAAANGISGDFESLCKNPKAKEYILGELSRIG
KEKKLKGFEFIKDVHLEPVPFDMDRDLITPTYKKKRPQLLKYYQGVIDNMYKSAK
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacgtggcggaggtcgagccaggccgcccggctgccgatggccggccggccgtg
gggcccacctaccggagcgccttcgcccgcgacggattcccaccccccgtccccgggatg
gacagctgctacgacatcttccgcatggccgtggagaagtatccaaacaacagaatgctt
ggccaccgtgagattgttgatgggaaggctggtgcatatgtctggaagacatataaggag
gtgtttgacattgcaaacaaaattggtaactctattaggagctgtggacttgcaaagggt
agtcgttgtggtatctatggtgctaactgtcctgaatggattatcacaatggaggcttgc
aacgcccatggaatctactgtgttccattatacgacacacttggagctggtgcggtagag
tttattctgtgccatgcagaagttgagattgtttttgctgaggaaaagaaaattgagctg
ctcgtgaagactttacccaagtcaaatgagttcttaaaaacgatcgtgagtttcagcaag
gtaactcaagaacagaaggaagaagttcgcaaatatgggctatcagtgtactcgtgggat
gaatttctgtccctggcggctgaccaagaatttgatcttccagtcaaggagaagtcagat
atatgcactataatgtatactagtggaactactggtgacccgaaaggagtactgatatca
aatgcgagcattatttgtctcattgcaggtgtggacaggttacttagctctcaaaacgag
gagttggcagaaagcgacgtttacatgtcttaccttcctcttgcacacatttttgatcgt
gttgtggaggaattgtttattttccatggtgcctctattggattctggcgaggggatgtt
aagctgctagttgaagatattggtgtgctgaaaccaacaattatgtgtgctgttcctcgt
gttcttgatcggatattttctggactacaagcaaaaatttcctctggtgggtttttaaag
agtacactgtttaatgttgcttacaaattcaagcattttagaatgatgagaggagctaag
cacaatgaagctgcttccatatgtgacaaagtagtttttagtaaggtgaaagagggtctt
ggtggaaacgttagagttattttatctggagctgctccacttgctacccatgttgaagaa
tacttgcgagtggtgacatgtgcacatgtcttacaaggatatggtctcacggaaacttgt
gctggatcttttgtctcgctaccaaatcaaatgtccatgataggaactgttggcccccca
gtgccaaacatcgatgttcgtctggagtcggtcccagaaatggattacgatgcactcgcg
agcacgcctcgtggagagatatgcatcaggggagaaacattattctcaggatactacaag
cgtgaagaccttacaaaggaggtcctgattgatggatggttccacactggtgacattggt
gagtggcaacctgatggatgtatgaaaatcatagatcgcaaaaagaatatattcaaactt
tcacagggtgaatatgtggcggttgaaaatttggagaatgtttacggccttgtttctgct
ctagactcgatatgggtatatgggaacagctttgagtccttccttgttgctgtggtcaat
cccaacaaggaggctctcgagagttgggctgcagcaaatggaataagtggtgattttgag
tccttgtgcaagaatccaaaagcaaaagaatacattttaggagaactgtcaagaatagga
aaagagaagaagctcaaaggttttgaattcataaaagatgtgcacctggaaccagtaccg
tttgacatggaccgtgatttgatcactccgacatacaaaaagaagcgtccgcaactgctc
aagtactaccagggcgtgattgacaacatgtacaaaagtgctaagtga
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