KEGG   Miscanthus floridulus: 136450262
Entry
136450262         CDS       T10264                                 
Name
(RefSeq) protein VACUOLELESS1-like
  KO
K20180  vacuolar protein sorting-associated protein 16
Organism
mflo  Miscanthus floridulus
Pathway
mflo04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    136450262
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mflo04131]
    136450262
Membrane trafficking [BR:mflo04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    136450262
   Hops complex
    136450262
SSDB
Motif
Pfam: Vps16_C Vps16_N WD40_WDHD1_1st
Other DBs
NCBI-GeneID: 136450262
NCBI-ProteinID: XP_066306742
LinkDB
Position
5:95145168..95161485
AA seq 877 aa
MSSSVSIAAEWDLLSDRFYRRLTLYSPLLWSTPAAAGATSSSSGVGGAVIGRLDLSTHIV
AAAPFGGPIAAVRDDSKIVQLHSEPSRRRLLLFSSSAHPIASAPWPPLLPRLHSLAFSSS
LSLLALLSDGSFLRFRLPDLQPSPSSSPVPLLPPASGGVADALFWGGGVAILTEDNRVVV
ATDIEADDPHPRDLADPGIGDEEHVLCMAVVEPQFVMSGSPEVLLAVGDRVIAVDEDGVQ
VLGVELEIGPVQKMAVSPNGKLLAAFAHDGRLLVIPTDFSRIIFEYECDSALPPEQIAWC
GLDSVLVYWPEVLLMVGPNGDPVQYNYDEPIKLIPECDGVRILSNSSMEFLHRVPDSTTL
IFGIGSMSSAALLYDARDHYDRQSAKAYDNYQLISSSLPEAIEACIDAAGHEFDVSRQRT
LLRAATYGLAFCSRFPHERFQEMCKMLRVLNAVRDPEIGMPLTIQQYKLLTVTVLIGRLI
NANQHLLALRISEYLNLNPEVVIMHWACEKITASTTLPDTVLLEGLLDKLRLCKGISYAA
VAAHADNSGRRRLAAMLVDHESQSSKQIPLLLSIDEQDKALSKAIESGDTDLVYLVLFHI
WQKVAVEKKAPLDFFGVINARPVARDLFMAYARHSKHEELKDFFLSTGRLQDAAFLLLKE
SRELEKNPMASKGSPLHAPQVRLIEQAHRLFAETKEHVFESKASEEHAKLLRSQHELEVS
TKQAIFVGSSVSDTIKTCIAMGNERAALRVKSEFKVPDKRWYWLKTCALATVGNWDALEK
FSREKRPPGGYKPFVEACIDAGQKNEAVKYIPKLTDPRERSEAYARMGMAREAEEAASQA
KDSDELFGRLKITLAQSSAAASIFDTLRDRLSFQGAY
NT seq 2634 nt   +upstreamnt  +downstreamnt
atgtcctcctccgtctccattgcggcggagtgggaccttctctccgaccgcttctaccgc
cgactcacgctctactccccgctcctgtggtccaccccagccgcggccggtgcgacctcg
tcctcctccggcgtcggcggtgctgtgatcggtcgcctcgacctgtccacccacattgtc
gccgccgcgccctttggaggcccgatcgccgccgtccgcgacgactctaagatcgtgcag
ctccactccgagccctcccgccgccgcctcctcctcttctcctcctccgcccacccaatt
gcctccgcgccctggccaccccttctcccgcgcctccactcgctcgccttctccagctcc
ctcagcctcctcgcgctcctctccgacggctcgttcctccgcttccgcctccccgatctg
caacccagccctagctccagtcccgttcccttgctcccgccggcctccggcggcgtcgcc
gacgctctattctggggcggcggtgtagccatcctcacggaagacaaccgcgtcgtggtg
gccactgacatcgaggccgacgaccctcacccccgtgacctcgccgacccaggcatcggt
gacgaggagcatgttctgtgtatggccgtggtggagccacagtttgtcatgtcggggagc
ccagaagtgttgcttgcggttggcgaccgggtcatcgcagttgacgaggatggcgtacag
gtgcttggggtggagctggagattggacccgtgcagaagatggcagtgtcacccaatggc
aagcttcttgcagcgtttgcacatgatgggcgcctactcgtgatccccactgatttctct
aggatcatattcgagtatgagtgcgattctgcattgccaccagagcaaatagcttggtgt
ggactagacagtgtactcgtctactggcctgaggtgctgttgatggttggtccaaatgga
gatcctgtccaatacaattacgatgaacccataaaactgattcctgagtgcgatggtgta
agaatcctctctaactcaagtatggaatttctacaccgagtcccggactctactacatta
atttttggcattggaagcatgtcttcagcggcattactgtatgatgctcgtgatcactat
gacaggcaaagtgcaaaggcttatgacaactatcaactaatatcatcttcattgcctgag
gcaattgaggcttgcattgacgctgctggccatgagtttgatgtttcacgccagcgcaca
ttgctgagagctgctacatatggcctagctttctgcagtcgatttccacatgaacgcttt
caagaaatgtgcaaaatgctgagagttctaaatgctgttcgtgatcctgagattgggatg
ccactgaccattcagcagtacaagcttcttactgtaacggtgctcattggacgtctcatt
aatgctaatcagcaccttttggcgcttcgcatctctgagtaccttaacctgaacccggag
gttgtgataatgcattgggcgtgtgagaagataacagcatcaacaactcttccagataca
gtccttcttgagggtctgcttgataagctcaggctatgtaaagggatatcatatgctgca
gtggcagctcatgcagataacagtggtcggcgaaggttggctgcaatgctcgttgatcat
gagtcacagtcctctaagcagattcccttgttgctaagcatcgatgaacaagacaaagca
ttatcaaaggcaattgaaagtggcgatactgatcttgtgtaccttgtgctattccatatc
tggcagaaggtagctgtagagaagaaagctcctttggatttttttggtgttataaatgca
aggcctgtggctagagatttgtttatggcatatgcaagacattctaagcatgaagaattg
aaggacttctttttatcgactgggagacttcaagatgccgcctttcttttgttgaaggag
tcaagggaattggagaagaaccccatggcaagcaaggggtctcctctccatgctccacaa
gtgaggctcattgagcaggcccatagactttttgctgagaccaaggaacatgttttcgaa
tccaaagcttctgaagagcatgcgaaattgctaagatcacagcatgaacttgaagtttcc
acaaagcaggcaatatttgtgggttctagtgttagtgatacaatcaaaacctgtattgca
atgggaaacgagcgagctgcactcagagtgaagtccgagttcaaggttcctgataagagg
tggtactggcttaaaacatgcgctttagccacagttggaaactgggatgctttggaaaaa
ttttcaagagagaaaaggccaccaggaggttataaaccttttgttgaagcatgcattgat
gctggtcaaaaaaatgaagctgtcaaatatattccaaagttaacagatcctcgtgaaaga
tctgaggcatatgctcggatgggcatggcaagggaagctgaagaagcagcctcacaagct
aaagatagtgatgagctatttggccgcctaaagattacacttgcacagagcagtgctgct
gcctccattttcgacacattgcgggatcggctatcttttcaaggagcatattga

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