Miscanthus floridulus: 136450262
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Entry
136450262 CDS
T10264
Name
(RefSeq) protein VACUOLELESS1-like
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
mflo Miscanthus floridulus
Pathway
mflo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
136450262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mflo04131
]
136450262
Membrane trafficking [BR:
mflo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
136450262
Hops complex
136450262
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_C
Vps16_N
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
136450262
NCBI-ProteinID:
XP_066306742
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Position
5:95145168..95161485
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AA seq
877 aa
AA seq
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MSSSVSIAAEWDLLSDRFYRRLTLYSPLLWSTPAAAGATSSSSGVGGAVIGRLDLSTHIV
AAAPFGGPIAAVRDDSKIVQLHSEPSRRRLLLFSSSAHPIASAPWPPLLPRLHSLAFSSS
LSLLALLSDGSFLRFRLPDLQPSPSSSPVPLLPPASGGVADALFWGGGVAILTEDNRVVV
ATDIEADDPHPRDLADPGIGDEEHVLCMAVVEPQFVMSGSPEVLLAVGDRVIAVDEDGVQ
VLGVELEIGPVQKMAVSPNGKLLAAFAHDGRLLVIPTDFSRIIFEYECDSALPPEQIAWC
GLDSVLVYWPEVLLMVGPNGDPVQYNYDEPIKLIPECDGVRILSNSSMEFLHRVPDSTTL
IFGIGSMSSAALLYDARDHYDRQSAKAYDNYQLISSSLPEAIEACIDAAGHEFDVSRQRT
LLRAATYGLAFCSRFPHERFQEMCKMLRVLNAVRDPEIGMPLTIQQYKLLTVTVLIGRLI
NANQHLLALRISEYLNLNPEVVIMHWACEKITASTTLPDTVLLEGLLDKLRLCKGISYAA
VAAHADNSGRRRLAAMLVDHESQSSKQIPLLLSIDEQDKALSKAIESGDTDLVYLVLFHI
WQKVAVEKKAPLDFFGVINARPVARDLFMAYARHSKHEELKDFFLSTGRLQDAAFLLLKE
SRELEKNPMASKGSPLHAPQVRLIEQAHRLFAETKEHVFESKASEEHAKLLRSQHELEVS
TKQAIFVGSSVSDTIKTCIAMGNERAALRVKSEFKVPDKRWYWLKTCALATVGNWDALEK
FSREKRPPGGYKPFVEACIDAGQKNEAVKYIPKLTDPRERSEAYARMGMAREAEEAASQA
KDSDELFGRLKITLAQSSAAASIFDTLRDRLSFQGAY
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcctccgtctccattgcggcggagtgggaccttctctccgaccgcttctaccgc
cgactcacgctctactccccgctcctgtggtccaccccagccgcggccggtgcgacctcg
tcctcctccggcgtcggcggtgctgtgatcggtcgcctcgacctgtccacccacattgtc
gccgccgcgccctttggaggcccgatcgccgccgtccgcgacgactctaagatcgtgcag
ctccactccgagccctcccgccgccgcctcctcctcttctcctcctccgcccacccaatt
gcctccgcgccctggccaccccttctcccgcgcctccactcgctcgccttctccagctcc
ctcagcctcctcgcgctcctctccgacggctcgttcctccgcttccgcctccccgatctg
caacccagccctagctccagtcccgttcccttgctcccgccggcctccggcggcgtcgcc
gacgctctattctggggcggcggtgtagccatcctcacggaagacaaccgcgtcgtggtg
gccactgacatcgaggccgacgaccctcacccccgtgacctcgccgacccaggcatcggt
gacgaggagcatgttctgtgtatggccgtggtggagccacagtttgtcatgtcggggagc
ccagaagtgttgcttgcggttggcgaccgggtcatcgcagttgacgaggatggcgtacag
gtgcttggggtggagctggagattggacccgtgcagaagatggcagtgtcacccaatggc
aagcttcttgcagcgtttgcacatgatgggcgcctactcgtgatccccactgatttctct
aggatcatattcgagtatgagtgcgattctgcattgccaccagagcaaatagcttggtgt
ggactagacagtgtactcgtctactggcctgaggtgctgttgatggttggtccaaatgga
gatcctgtccaatacaattacgatgaacccataaaactgattcctgagtgcgatggtgta
agaatcctctctaactcaagtatggaatttctacaccgagtcccggactctactacatta
atttttggcattggaagcatgtcttcagcggcattactgtatgatgctcgtgatcactat
gacaggcaaagtgcaaaggcttatgacaactatcaactaatatcatcttcattgcctgag
gcaattgaggcttgcattgacgctgctggccatgagtttgatgtttcacgccagcgcaca
ttgctgagagctgctacatatggcctagctttctgcagtcgatttccacatgaacgcttt
caagaaatgtgcaaaatgctgagagttctaaatgctgttcgtgatcctgagattgggatg
ccactgaccattcagcagtacaagcttcttactgtaacggtgctcattggacgtctcatt
aatgctaatcagcaccttttggcgcttcgcatctctgagtaccttaacctgaacccggag
gttgtgataatgcattgggcgtgtgagaagataacagcatcaacaactcttccagataca
gtccttcttgagggtctgcttgataagctcaggctatgtaaagggatatcatatgctgca
gtggcagctcatgcagataacagtggtcggcgaaggttggctgcaatgctcgttgatcat
gagtcacagtcctctaagcagattcccttgttgctaagcatcgatgaacaagacaaagca
ttatcaaaggcaattgaaagtggcgatactgatcttgtgtaccttgtgctattccatatc
tggcagaaggtagctgtagagaagaaagctcctttggatttttttggtgttataaatgca
aggcctgtggctagagatttgtttatggcatatgcaagacattctaagcatgaagaattg
aaggacttctttttatcgactgggagacttcaagatgccgcctttcttttgttgaaggag
tcaagggaattggagaagaaccccatggcaagcaaggggtctcctctccatgctccacaa
gtgaggctcattgagcaggcccatagactttttgctgagaccaaggaacatgttttcgaa
tccaaagcttctgaagagcatgcgaaattgctaagatcacagcatgaacttgaagtttcc
acaaagcaggcaatatttgtgggttctagtgttagtgatacaatcaaaacctgtattgca
atgggaaacgagcgagctgcactcagagtgaagtccgagttcaaggttcctgataagagg
tggtactggcttaaaacatgcgctttagccacagttggaaactgggatgctttggaaaaa
ttttcaagagagaaaaggccaccaggaggttataaaccttttgttgaagcatgcattgat
gctggtcaaaaaaatgaagctgtcaaatatattccaaagttaacagatcctcgtgaaaga
tctgaggcatatgctcggatgggcatggcaagggaagctgaagaagcagcctcacaagct
aaagatagtgatgagctatttggccgcctaaagattacacttgcacagagcagtgctgct
gcctccattttcgacacattgcgggatcggctatcttttcaaggagcatattga
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