Miscanthus floridulus: 136450448
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Entry
136450448 CDS
T10264
Name
(RefSeq) nuclear pore complex protein NUP85-like isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
mflo Miscanthus floridulus
Pathway
mflo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136450448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136450448
03036 Chromosome and associated proteins [BR:
mflo03036
]
136450448
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
136450448
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
136450448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
136450448
NCBI-ProteinID:
XP_066306985
LinkDB
All DBs
Position
5:108608465..108617923
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AA seq
759 aa
AA seq
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MPGMPTDGGGAIIPFTGEPAQAAPPPPPVRPIRHGVAPPIFRIYVSWSSGNLLQVACLRP
PNSEGGGGTEEVVGSVVEVNLGDGGSGGSEAEEKIDEGEMRRIEYGSVPAFALLQSRKNT
LADAATMSHVPSVPDHAEWWQYVLEYSKTIGNLLGNPDPPVFMIEDPKTILKVREKPTSL
RAAWELLEIFYVDKHLQGWLPERLVDWLSDFDSLLSTMASTVYSKLSNFQKKLINLQIVE
DDPDYWNGLSAALSVGWLDIVVNMLRFHGSYQLDQMDNRETENGLVEAVAVLVSTMPRLR
PNLPTGKLGQCCKTRPDFIKAWEKWRGQVTKLECSAFWIQCGHQKTRYGLKNLLHIMMGN
INELTDATSHWLELFASHFLYIKPFTVGFEGMHLLAQKCIQLKPSSGTNGLTGLILGVLS
ENTEVVLAECTKNFGPWLVTHAMELLTADNDYADVMLHEERLNLGGISIEELHRLVYAQV
LCSHSLTWQFLMPFCLFIFPRDLFSLLPLGWLTEAWIHPMIAPTYLSSCLNQGLGLLEIL
LLKQPIQDNCLVLKTLEICRLYELENVSTIIMKIAGIYHWKHGRKGTGVYWFQQAHDKVC
LDRIAQQLFEHIGKSVTDDSFKQWEGLLELLGSDIGSAGGLEFLHRYRDFKRSLRQALDR
RCGEAARQTVDFLIQLMKNPSTPQRFWLPLLHDSVELLNSKLSPLMNVAETTLLLNKLQE
LSMAKRCPDFSSNHLPSHAISSVRLALASNLARAILGDP
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgcctggtatgccgacggacggtggtggtgctatcataccttttacaggggagcctgcc
caagcggcgcccccgccgccacccgtgcggccaatccgccacggcgtggcgccacccatc
ttccgcatctacgtctcctggtccagcggcaaccttctgcaggtcgcgtgcctccgcccg
ccgaattcggaaggtggcggcggcacggaggaggtcgttgggagtgtggtggaggtgaat
ctcggcgacggtggcagcggtggctcggaggccgaggagaaaattgacgagggggagatg
cggcggatcgagtacgggtcggtgccggccttcgcgctgctgcagagcaggaagaacacc
cttgcagatgctgctacaatgtcacacgtgccctcagtccccgatcatgcagaatggtgg
caatatgtgcttgaatacagcaaaaccattggcaatctccttgggaacccagaccctcct
gttttcatgattgaagaccccaagacaattcttaaggttagggagaaaccgacaagttta
agggctgcttgggagttgttggagatattctatgttgataaacatttgcaaggctggctt
cctgagcgtcttgttgattggttatccgattttgacagcctgttgtcaacgatggcgagc
acagtgtactctaagctcagcaatttccagaaaaaactcattaacttgcagattgttgaa
gatgatcctgattactggaatggtttgtcagcagcactttcagttggatggcttgatatt
gtggtgaatatgctacggtttcatggatcctaccaattagatcagatggataaccgtgag
acagaaaatggattggtcgaggctgttgctgttcttgtatcaacgatgccccgcttgaga
ccgaatttgccaactggtaaattaggccagtgctgcaaaacaagacctgattttatcaag
gcatgggaaaagtggcgaggtcaagtaactaaactggagtgcagtgcattttggatccag
tgcggccaccaaaaaacccgttatggtttgaagaatttgcttcatattatgatggggaac
ataaatgaactcactgatgctacttcccattggctggagctgtttgcttctcattttctt
tacataaaaccatttacagtgggttttgaagggatgcaccttttagcacagaaatgcata
cagcttaagccatcctctggcactaatggattaacaggcctcattcttggtgtcctttca
gaaaatacagaggttgtcttggcagaatgcacaaaaaattttggcccttggctggtcaca
catgctatggaacttctgacagctgataatgactatgcggatgttatgttgcatgaagag
cgacttaacttaggtggtataagcatagaggaactgcaccggctagtctatgctcaagtt
ttatgttctcattctttaacttggcagttcttgatgcccttttgtctgtttattttccct
cgagatctcttttcccttttacctctcggctggcttactgaagcatggatccatccaatg
attgcgcctacttatctgtcctcatgtctaaaccaaggcctaggactcttggagattcta
cttctcaagcaacccatacaagataattgcctagtactcaagactttggaaatttgccga
ttgtacgaactggagaatgttagtacaatcatcatgaagattgctggcatttatcattgg
aagcatggacgaaaaggaactggtgtatactggttccagcaagctcatgataaagtttgt
cttgacagaattgctcagcagttgttcgagcacattgggaagtcagtgacagatgatagt
tttaagcaatgggaagggctgcttgagctccttggttctgacattggtagtgcgggcggt
cttgagttccttcacaggtaccgggatttcaagaggtctctgcgacaagctctagacaga
aggtgtggtgaggctgctcggcaaactgtggattttttaatacagcttatgaaaaaccca
tccacaccgcaacgtttctggctaccccttctacatgactcggtggagctacttaatagc
aaactcagccctcttatgaatgttgctgagacgacattgttgctcaacaagctgcaagag
ctgtcaatggccaagcgttgccctgatttttccagtaatcacctaccaagccatgcgata
agctctgtgagattggctctggcatcaaatctggcacgtgccattcttggagacccgtag
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