KEGG   Miscanthus floridulus: 136450494
Entry
136450494         CDS       T10264                                 
Name
(RefSeq) protein PAT1 homolog 1-like
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
mflo  Miscanthus floridulus
Pathway
mflo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    136450494
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mflo03019]
    136450494
Messenger RNA biogenesis [BR:mflo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     136450494
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     136450494
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-GeneID: 136450494
NCBI-ProteinID: XP_066307045
LinkDB
Position
5:112323905..112329914
AA seq 808 aa
MLGVEPEGRGGASSSAAADNFDAGQYAFFGKEPLDGFELGGLEEAGSDGNGGGFGGPDEG
LYRLNSVGDEIDDLSNLSDIDDLASTFAKLNRSISGIRNPGVIGDRRSISRGSSLTVDWA
EDVEFSNWGDQDTFENEEFHESKRWWSSNSSVQQGDSNSRPLSRTSSYPQQPLQHRSSEP
FVLPKTSSFTSFPPPVAGGGRSPYPAQGLTRHGSIPSIGAGLQMGSPSMSLSASPYHMVG
PSHGLPYTGGMPYGALNLPVNNPVQNDWSNHGNPFTGEHLNLLPNLLHKQLSLPNSPMPS
LLFSQHQQRLAQVQSPHQNYLNITPHLLYPHHSAEITGRFDSVGSSHSSRDKRSRSGRGK
HSIRFSQPPSDTGSQNGDSGGIKFRSKYMSSEEIESILRMQHSASHSSDPYVVDYYHQAC
MAKRGATSKQKTNFSPTSMKDIPSKSRSSSDQHTYLQVDALGRVSFSSIRRPRSLLEVDH
PSSADGSHDQKSTVRPLEKEPMLAARVTVEDALCLLLEVDDTDRLLQSSQSQDNIFQLKR
RRQVLLEGLAASLQFVDPLGPSKSGHSSGLALKDDVVFLRIVSLPKGRKFLARYLRLLVP
GSELTRIVCMAIFRHLRFLFGGLPSDSSAAEITVALAKTVSSCVHHMELGALSACLAAVV
CSSEQPPLRPLGSSAGDGASLVIKSVLDRATELLTDRHAAASYTVPNRALWQASFDAFFG
LLTKYCVSKFESIQQMFVMQAPSSGIGPEASKATSKEMPVELLRASLPHTNEQQRQRLLD
FAQRSMPVTGFNPSGARGGHITSESVPG
NT seq 2427 nt   +upstreamnt  +downstreamnt
atgctgggcgtcgagcccgagggcagaggcggtgcgtcctcctccgccgccgcagataat
tttgacgctgggcagtacgccttcttcgggaaggagccactggacgggttcgagctcggg
ggcttggaggaagccggcagtgatggcaatggtggtggattcggtgggccagacgagggg
ctgtaccggctgaactctgttggagatgagattgacgatctgagtaacctgtctgacatt
gatgatcttgcaagcacctttgctaagttgaaccgaagcattagtggaatccggaatcct
ggtgttattggggacaggagatccatttcaagaggaagttctttaactgttgactgggct
gaggatgtggagttttcaaactggggagatcaagacacatttgaaaatgaggaattccac
gaaagtaaaagatggtggtcatccaattcttcagttcagcaaggggattccaactccaga
ccactaagtcgaacatcttcctaccctcagcagccactgcagcaccggtcaagtgaacct
ttcgttttaccaaagacatcttcatttacctcattcccaccacctgttgctggtggtggt
agatccccttaccctgctcaaggccttacacgtcatgggagcattccatcaattggtgct
ggtctccaaatgggttctccgagcatgtcactttctgcttctccataccatatggtcgga
ccatctcatggtctgccatacacgggaggaatgccttatggtgctcttaacctgcctgta
aacaatccagtgcaaaatgattggtcgaaccatggtaaccctttcactggggaacatctt
aatctactgcccaacctattgcacaaacaattgtcacttcctaatagcccaatgccgtca
ctcctattttctcagcatcagcagagattggcacaggtccaatcaccccatcagaattac
ctcaatataactccacacctgctatatccccatcactctgcagagattacaggcaggttt
gattctgttggcagttctcattcatcaagagacaagagatcaaggtcggggaggggaaag
catagcattcgcttctctcaaccaccatctgatactggtagccagaatggtgacagtgga
ggtataaagtttagatccaagtacatgtcatctgaagagattgaatcaatcttaaggatg
cagcattccgcaagtcacagcagtgatccttatgttgttgattactaccatcaagcttgt
atggcaaaaaggggcgccacttctaagcaaaagaccaatttctccccaacatcaatgaaa
gatataccatccaagtctcgatccagcagtgatcagcacacatatcttcaggttgatgct
cttggaagagtatctttctcttccatacgtaggcctcggtctcttcttgaagttgaccat
ccttcatctgctgatggctctcatgatcagaagtctactgtgaggcccctggagaaagaa
ccaatgcttgcagcaagagtcactgttgaagacgccctttgccttcttcttgaggttgat
gacactgaccgtctgttgcagtctagccagtcacaggacaacattttccaactgaagcga
agacggcaagtcctcctggaaggtctagcagcatcactgcagtttgttgatcctctcgga
cccagcaaatctggtcattcatctgggttagccctgaaggacgatgttgtttttcttcgc
attgtttctctgcccaaaggacgtaagtttttagcacgttaccttcggcttcttgtccct
ggcagcgaattgacccggatagtatgcatggctatttttcgccatttgaggttcttgttt
gggggtttgccatcagactctagtgcagcagaaattacagttgctcttgcgaagactgtt
tcgtcttgtgtgcatcacatggaacttggtgctcttagtgcctgccttgctgctgttgtc
tgttcatctgaacagccacccctgcgccctcttggtagctctgctggtgatggggcttct
ctagttattaaatcagtactggatcgagcaactgagttactgactgatcgccatgctgca
gccagctacactgtgccaaaccgtgctctctggcaggcatcgtttgatgctttctttggg
cttctaacaaaatactgtgtcagtaagtttgaaagtattcagcagatgtttgtcatgcag
gcaccaagctcaggaattggacctgaggcttccaaagctactagcaaggagatgcctgtt
gagctacttcgtgcaagccttcctcatacaaacgagcagcaacgccagcggcttcttgat
tttgctcagagatccatgccagtaacaggtttcaatccctcaggtgctagaggtgggcac
ataacttcagaatctgttcctggttga

DBGET integrated database retrieval system