Miscanthus floridulus: 136450573
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Entry
136450573 CDS
T10264
Name
(RefSeq) nuclear pore complex protein NUP85-like isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
mflo Miscanthus floridulus
Pathway
mflo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136450573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136450573
03036 Chromosome and associated proteins [BR:
mflo03036
]
136450573
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
136450573
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
136450573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
136450573
NCBI-ProteinID:
XP_066307166
LinkDB
All DBs
Position
5:117335193..117343862
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AA seq
762 aa
AA seq
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MPGMPGMPTDGGGAIVPFTGEPAQAAPPPPPVRPIRHGVAPPIFRIYVSWSSGNLLQVAC
LRPPNSEGGGGTEELVGSVVEVNLGDGGSGGSEAEEKIDEGEMRRIEYGSVPAFALLQSR
KNTLADAATMSHVPSVPDHAEWWQYVLEYSKTIGNLLGNPDPPVFMIEDPKTILKVREKP
TSLRAAWELLEIFYVDKHLQGWLPERLVDWLSDFDSLLSTMASTVYSKLSNFQKKLINLQ
IVEDDPDYWNGLSAALSVGWLDIVVNMLRFHGSYQLDQMDNRETENGLVEAVAVLVSTMP
RLRPNLPTGKLGQCCKTRPDFIKAWEKWRGQVTKLECSAFWIQCGHQKTRYGLKNLLHIM
MGNINELTDATSHWLELFASHFLYIKPFTVGFEGMHLLAQKCIQLKPSSGTNGLTGLILG
VLSENTEVVLAECTKNFGPWLVTHAMELLTADNDYADVMLHEERLNFGGISIEELHRLVY
AQVLCSHSLTWQFLMPFCLFIFPRDLFSLLPLGWLTEAWIHPMIAPTYLSSCLNQGLGLL
EILLLKQPIQDNCLVLKTLEICRLYELENVSTIIMKIAGIYHWKHGRKGTGVYWFQQAHD
KVCLDRIAQQLFEHIGKSVTDDSFKQWEGLLELLGSDIGSAGGLEFLHRYRDFKRSLQQA
LDRRCGEAARQTVDFLIQLMKNPSTPQRFWLPLLHDSVELLNSKLSPLMNVAETTLLLNK
LQELSMAKRCPDFSSNHLPSHAISSVRLALASNLARAILGDP
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgcctggtatgcctggtatgccgacggacggtggcggtgctatcgtaccttttacaggg
gagcctgcccaagcggcgcccccgccgccacccgtgcggccaatccgccacggcgtggcg
ccgcccatcttccgcatctacgtctcctggtccagcggcaaccttctgcaggtcgcgtgc
ctccgcccgccgaattcggaaggtggcggcggcacggaggagctcgttgggagtgtggtg
gaggtgaatctcggcgacggtggcagcggtggctcggaggccgaggagaaaattgacgag
ggggagatgcggcggatcgagtacgggtcggtgccggccttcgcgctgctgcagagcagg
aagaacacccttgcagatgctgctacaatgtcacacgtgccctcagtccccgatcatgca
gaatggtggcaatatgtgcttgaatacagcaaaaccattggcaatctccttgggaaccca
gaccctcctgttttcatgattgaagaccccaagacaattcttaaggttagggagaaaccg
acaagtttaagggctgcttgggagttgttggagatattctatgttgataaacatttgcaa
ggctggcttcctgagcgtcttgttgattggttatccgattttgacagcctgttgtcaacg
atggcgagcacagtgtactctaagctcagcaatttccagaaaaaactcattaacttgcag
attgttgaagatgatcctgattactggaatggtttgtcagcagcactttcagttggatgg
cttgatattgtggtgaatatgctacggtttcatggatcctaccaattagatcagatggat
aaccgtgagacagaaaatggattggtcgaggctgttgctgttcttgtatcaacgatgccc
cgcttgagaccgaatttgccaactggtaaattaggccagtgctgcaaaacaagacctgat
tttatcaaggcatgggaaaagtggcgaggtcaagtaactaaactggagtgcagtgcattt
tggatccagtgcggccaccaaaaaacccgttatggtttgaagaatttgcttcatattatg
atggggaacataaatgaactcactgatgctacttcccattggctggagctgtttgcttct
cattttctttacataaaaccatttacagtgggttttgaagggatgcaccttttagcacag
aaatgcatacagcttaagccatcctctggcactaatggattaacaggcctcattcttggt
gtcctttcagaaaatacagaggttgtcttggcagaatgcacaaaaaattttggcccttgg
ctggtcacacatgctatggaacttctgacagctgataatgactatgcggatgttatgttg
catgaagagcgacttaactttggtggtataagcatagaggaactgcaccggctagtctat
gctcaagttttatgttctcattctttaacttggcagttcttgatgcccttttgtctgttt
attttccctcgagatctcttttcccttttacctctcggctggcttactgaagcatggatc
catccaatgattgcgcctacttatctgtcctcatgtctaaaccaaggcctaggactcttg
gagattctacttctcaagcaacccatacaagataattgcctagtactcaagactttggaa
atttgccgattgtacgaactggagaatgttagtacaatcatcatgaagattgctggcatt
tatcattggaagcatggacgaaaaggaactggtgtatactggttccagcaagctcatgat
aaagtttgtcttgacagaattgctcagcagttgttcgaacacattgggaagtcagtgaca
gatgatagttttaagcaatgggaagggctgcttgagctccttggttctgacattggtagt
gcgggcggtcttgagttccttcacaggtaccgggatttcaagaggtctctgcaacaagct
ctagacagaaggtgtggtgaggctgctcggcaaactgtggattttttaatacagcttatg
aaaaacccatccacaccgcaacgtttctggctaccccttctacatgactcggtggagcta
cttaatagcaaactcagccctcttatgaatgttgctgagacgacattgttgctcaacaag
ctgcaagagctgtcaatggccaagcgttgccctgatttttccagtaatcacctaccaagc
catgcgataagctctgtgagattggctctggcatcaaatctggcacgtgccattcttgga
gacccgtag
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