Miscanthus floridulus: 136450730
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Entry
136450730 CDS
T10264
Name
(RefSeq) transcription initiation factor TFIID subunit 12b-like isoform X1
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
mflo Miscanthus floridulus
Pathway
mflo03022
Basal transcription factors
Brite
Transcription machinery [BR:
mflo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
136450730
Coactivators
SAGA/TFTC/STAGA complex
136450730
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
136450730
STAGA complex
136450730
TFTC complex
136450730
SAGA complex
136450730
SLIK complex
136450730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136450730
NCBI-ProteinID:
XP_066307418
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Position
5:complement(128328404..128332730)
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AA seq
558 aa
AA seq
DB search
MADPPPVAASASPAQADQLAAAAASVSTPQNPNPNHLLSPQIPPSPTVSDLSAHISSPQQ
LDPAAAAAAAAASGGGGSMDYPPRPPQLQAPSPTQAGAGASGFGQIPRSGSASHLSTASQ
LQQYAAARMYGGQMSFSGGGGLVGQQQQQQLAGRAPMLGQGQLGMLQGQGNAASAAHFGL
QSQMMAQARQKGMAQGTQLNNANTAQVLQGMQPMGVMGTMGMNQMRPNGTIPYGAQQRFA
HAQMRPQASQQPALSPQKVPGQGLSRTASITALNSQLSGSSQNGQMVAMSVPQQQQQQWL
KQMQSSMGSPVSPQQQYQHQQRLLLMQQLQQKTGLSQQQLLQLQQQHPHLSAQQLIQQQH
FLQQLQQQQPLQSPRVSASGSQKSANLTGSQPGTPLSVGTMTGGSASQGAEGTSQLLGKR
KIQDLVAQVDPLGKVDPEVEDLLLEIADDFIDSVTAFACTLAKHRKSSVVEAKDVLLHLE
RNWHLSVPGFSREDKNPQRNSVKPLVDPQQSESDATGIRGTSNKLGANNSVGNRQIRPPM
AEPSAMPTVGPLSKAPRF
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccgccgcccgtggccgcctccgcctcgccggcgcaggctgaccagctcgct
gccgcggcggcctctgtgtccaccccgcagaaccccaaccctaaccacctcctctccccg
caaatccccccgtccccgaccgtctctgacctctccgcgcacatctcgtccccgcagcag
ctcgacccggcggccgcagcagcggcagctgccgcttcgggcggcggaggatccatggat
taccccccgcgcccgccgcagctgcaggcgccttcgcccacgcaggccggggccggcgcc
tccgggtttggccagatccctcgctcggggtcggcctcgcacctctccacggccagccag
ctccagcagtacgcggcggctaggatgtacggcgggcagatgagcttctcgggtggcgga
gggctcgtgggccagcagcagcagcagcagctggcggggcgcgcccccatgcttgggcag
ggccagctggggatgctgcaaggccaggggaacgcggcatctgcggcacattttgggctt
cagtcgcagatgatggcgcaggctaggcagaagggcatggcacaaggcacacagttgaat
aatgctaatacagctcaagtgctgcaagggatgcagcccatgggtgtcatgggtactatg
gggatgaaccagatgagaccgaatggaactattccctatggtgctcaacaaaggtttgcc
catgcgcaaatgaggccacaagcgtctcaacaacctgcactgtctccacagaaggtacct
ggtcaaggtctgtcgaggacagcgtcaattacagcattaaattcacaactgtctggatca
tcacaaaatggacagatggtggcaatgtctgtgcctcagcaacagcagcagcagtggttg
aagcaaatgcaatcatccatgggctcaccagtttccccacagcaacaatatcagcaccag
cagaggctcctgttgatgcagcaacttcagcagaagacaggattgagccaacaacaactt
ctccaactccaacaacagcatccacatctcagtgcccaacagctgattcagcagcaacat
tttctgcagcagttgcagcagcagcaaccgctacaatctccacgtgtttcagcatctggt
tcgcagaagtctgcgaaccttacaggctcacaaccgggtacacctttgtcagttggaact
atgactggtggaagtgcaagtcagggagctgaaggaactagccaacttcttgggaaaaga
aaaatacaagatctggttgcacaggtagatcccctaggcaaagttgaccctgaagtggag
gatttacttctagaaatcgctgatgacttcattgactcggtgactgcatttgcgtgtacc
ttggcaaagcacaggaaatcatcagttgttgaagccaaggatgtgttgctgcacttagaa
agaaattggcatttatctgttcctggtttctcaagggaggataagaatcctcaaagaaat
tctgtaaagccattggtagatccccaacaatcagaaagtgatgctactggtatcagaggc
acaagcaataaacttggtgctaataactctgttggcaaccgtcaaatacgacctccgatg
gcagaaccttcagcaatgccaacagtgggccctctatcgaaagccccccgcttctaa
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