Miscanthus floridulus: 136450822
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Entry
136450822 CDS
T10264
Name
(RefSeq) DNA polymerase alpha catalytic subunit-like
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
mflo Miscanthus floridulus
Pathway
mflo03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
136450822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mflo03032
]
136450822
Enzymes [BR:
mflo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
136450822
DNA replication proteins [BR:
mflo03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
136450822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DUF1744
DNA_pol_B_2
DNA_pol_B_exo2
Sigma70_ner
Motif
Other DBs
NCBI-GeneID:
136450822
NCBI-ProteinID:
XP_066307548
LinkDB
All DBs
Position
5:132259473..132270817
Genome browser
AA seq
1540 aa
AA seq
DB search
MEDSPADAAGSGRRTRTRTRGAEASGRAAVLQQLRSVRKGEIRASDVIQVKVDAPIYDTV
PEEEYNVLVARRKKEAGEFIIDDDGLGYVEDGREEDWSHRALPSSSDEGSDGEDGAPRKR
KQTRPPQAKRQPQQSAKAAASLSAAAAKTGQQISSMFTSSLFKRTGSDRAKGLALAADSI
VDDIIAEFAPDENDREERRRRVGRVCAPQPPPPTVSYVKPQKVIVDTEMVRSDNGNDMAV
ELKNDTEMETNLEEIPGSSAELVVDNLEEIPGSSAELVVDNKSLEEPKQEADGEVKVEKT
HRLNAKIKAEESRNNDVTSATAGWMKICGNGQNAVGEEGVAVDGNTNVDESSEFELKDGT
LPFYILDAYEEPFGANSGTVYLFGKVEVGKRFHSCCVIVKNIQRCIYAIPNHSVFPRDSI
SGIEKNPTSADLLPSLRATLHELASGLKSEIADKLSDLNVSNFVMTPVKRNYAFERTDLP
NGEQYVLKINYPYKDPALPADLRGEHFHALLGTSNSALELFLIKRKVKGPSWLSVSKFVT
RPSTQRVSWCKFEVTVDCPKDISVLTSTNLEVPTVVVAAVNLKTIINEKHNVHEIVSASL
ICCHRVKIDSPMRPEDWQKRGMLSHFTVMRKLEGSIFPIGLAKGASDRNEQAGSNVLALE
SSERALLNRLMIELSKLDCDVLVGHNISGFDLDVLLHRAQTCKVPSSMWSKIGRLRRSSM
PRLTKGSTLYGSGASPGIMSCIAGRLLCDTYLCSRDLLKEVSYSLTQLAETQLKKVRREV
SPHDIPLMFQSSSELLKLVEYGETDAWLSLELMFHLSVLPLTRQLTNISGNLWGKTLQGA
RAQRVEYLLLHSFHARKFIVPDKFARNKELNSTKRKMIADTEGANADDGAADPSVDDEVH
NGDQGKARKGPSYAGGLVLEPKKGLYDKYVLLLDFNSLYPSIIQEYNICFTTVERSSDGS
VPNLPASKATGVLPELLRSLVERRRMVKSWLKTASGLKRQQFDIQQQALKLTANSMYGCL
GFSNSRFYAKPLAELITLQGREILQNTVDLVQNNLNLEVIYGDTDSIMIHTGLDDISRAK
AIAGKVIQEVNKKYRCLEIDLDGIYKRMLLLKKKKYAAIKVALDGSLRENIERKGLDMVR
RDWSLLSKDIGDFCLNQILSGGTCDDVVESIHSSLVQVQVQMRSGQIELEKYVITKSLTK
APEDYPDAKNQPHVQVALRLKQNGYSGCSAGDTVPYIICSQQDSDNTHSVGIAQRARHPE
ELKRDPDKWMIDIDYYLSQQIHPVVSRLCASIQGTSPARLAECLGLDSAKFQSRVTESSN
QDTSTMLLSVIDDEDERYRGCEPLRLSCPSCSGTFDCPPVSSLITSATSVSDPNEGKDAT
ANFWRHMRCPRCPDNADESKISPPMLANQMKRQADNFISLYYKGLQMCDDEGCKYSTHSV
NLRVMGDSERGTICPNYPRCNGRLVRQYTEADLYKQLSYFCYVLDATRCLEKLDQKARLP
FEREFVAVGQTINLALLEIQKIRDRCAFGWVQLRDLAVSI
NT seq
4623 nt
NT seq
+upstream
nt +downstream
nt
atggaagactcacccgccgacgccgccggctccggccgccgcacgcgcacgcgcacccgg
ggcgccgaggcgtcggggcgcgccgccgtgctccagcaactccgctccgtccgcaaaggt
gaaatccgcgcctccgacgtcatccaggtgaaggttgacgccccgatctacgacaccgtc
ccggaggaggagtacaacgtgctcgtcgctcgccgcaagaaggaagccggcgagttcatc
atcgacgacgacgggctcggttacgtcgaggacggccgcgaggaggactggagccaccgc
gccctcccttcctcctccgatgagggatctgacggcgaggacggcgccccccgcaagcgg
aagcagacgcgccctccgcaggcgaagcgccagccgcagcagtccgccaaggcggcggcg
tctctctccgccgctgctgcaaagacgggccagcagatctcctctatgttcacatcctcg
ttgtttaagaggaccggcagcgaccgtgccaagggcttggcactggccgccgacagcatc
gtggacgacatcatcgccgagttcgcgcccgacgagaacgaccgtgaggagaggcggcgg
cgggttggtagggtttgtgcgccgcagcctcctcctccaacagtttcctacgtcaagcct
caaaaggtaattgtcgatactgaaatggtcagatcggacaatggaaatgatatggcggtg
gaattgaagaacgatactgagatggaaaccaatttggaggaaattcctggttctagtgct
gaattggtggttgataatctggaagaaattcctggttctagtgctgaattggtggttgat
aataagagtttggaggaaccaaagcaggaggctgatggggaagtaaaggtagaaaagaca
caccgcctcaatgcaaagattaaggcggaggagagcagaaataatgatgtgacgagtgca
acagcaggatggatgaagatatgtgggaacgggcagaatgcagtaggtgaagaaggggtg
gctgttgatggtaacaccaatgtggatgaaagttcagagtttgagctgaaagatggaacg
ctgccattctacatactggatgcatatgaggaaccatttggtgctaattcaggcacagtg
tatttgtttgggaaggttgaagttggcaagcggttccatagttgctgcgtcattgtaaaa
aatattcaaagatgcatatatgctattccaaaccattcagtgtttccaagggactccata
tcagggatagaaaaaaaccccacaagtgctgatcttttgccatcacttcgagcaactcta
catgagttggcgtcaggattaaagagtgaaatagctgacaaattgtcagacctcaatgtg
tcaaatttcgtaatgactccagtcaagaggaactatgcatttgagaggactgatctacca
aatggagagcaatatgtcctgaaaattaattatccttacaaggatcctgctctaccagcg
gacctcaggggtgaacattttcatgcactgcttgggacaagcaatagtgctcttgaatta
tttcttatcaagaggaaggtcaaggggccttcatggctgtcggtttccaaatttgtgaca
cggccatccactcagcgggtcagctggtgtaaatttgaagttacagttgattgcccaaag
gatatatctgttttgacaagtacaaatctagaagttcctactgttgtagttgcagcagtt
aatctcaaaactatcataaatgagaaacacaatgtgcatgagattgtgtcagcatctctc
atatgctgtcatcgggtgaagattgatagtccaatgcgtccagaagattggcagaaacgg
ggaatgctcagccattttactgttatgcgcaaacttgaaggtagcatatttcctataggc
cttgctaagggagcttctgataggaacgagcaggctggtagcaacgtgctggcactagaa
agcagtgaacgcgcattattaaatcgcttgatgattgagcttagcaaacttgactgcgac
gtacttgtgggacacaatatttcaggatttgatttggatgtgcttctacaccgtgctcag
acatgcaaagtgccaagcagcatgtggtccaagattggtcgtctcaggcgatcatcaatg
cccaggcttaccaaaggaagcacactctatggttctggagcaagtccaggaattatgtcc
tgtattgctggccgtcttctctgtgacacctatttatgctctcgtgaccttctgaaggag
gtgagttattccttgacacaacttgcagaaacacaattaaaaaaggtcaggagagaggtt
tctccacatgatatacctctgatgttccagtcttcgagtgaactgctcaaactggttgaa
tatggtgagacagatgcatggctttctttggagctcatgtttcacttgagtgttctccca
ctgacacggcaattgaccaatattagtggtaacctgtgggggaaaacacttcagggtgct
agggctcagagggtagaatatctactactgcattcatttcatgcaagaaaatttattgta
ccggataaatttgcacgcaacaaagagctgaactccacaaaaagaaaaatgattgctgat
actgagggtgcaaatgctgatgatggtgctgctgatccttccgttgatgatgaagtgcac
aatggtgatcaaggtaaagccagaaaaggaccttcatatgctggtggattagttttggag
cctaagaagggtctatatgacaagtatgttttacttctcgacttcaacagcctttatccg
tcaataattcaggaatacaacatctgctttaccaccgttgagcgttcttctgatggcagt
gtacctaatttgccagcatcaaaagctactggtgttttacctgagttgctgaggagtttg
gtggagaggagaaggatggttaaatcatggttgaagactgcgtctggtcttaaaaggcag
cagtttgatattcaacaacaagcattgaaactcactgcaaatagcatgtatggttgcttg
ggcttttccaattccaggttttatgcaaagccacttgctgagcttattacactccaaggt
agagagatattgcaaaacactgtagatctggttcagaataatttaaatttggaggttatc
tatggtgatacagattccatcatgatacatactggacttgatgacatctccagggcaaaa
gcaattgcaggaaaggttattcaggaggtgaacaagaagtaccgttgtctggagattgat
cttgatggcatatacaagagaatgttacttcttaaaaagaagaaatatgctgctattaaa
gtggcactggatggtagcttacgagagaacattgaacgcaaggggctcgatatggtcagg
cgcgattggagtttgctgtcaaaagacatcggagatttttgtctcaatcaaattttgtct
ggagggacatgtgatgatgttgttgagtcaatacatagttctcttgtccaggtgcaagtg
caaatgagaagtggtcaaatagaactcgaaaaatatgttatcacaaagagcttaacaaaa
gcgccagaagattatccagatgctaaaaatcagcctcatgttcaggttgctttgagactc
aagcaaaatggttactctggttgctcagctggtgacacagtcccttatataatttgctct
cagcaggactcagataatacacattctgtgggaatagctcagagagctagacatcccgag
gagttaaaaagagaccctgacaagtggatgattgacattgactattatttgtcacaacag
attcatcctgttgtttctcgtctgtgtgcttccattcagggtactagtccagctcgtctg
gctgaatgtctgggacttgattcggctaagttccaatcaagagtgactgagtctagcaat
caagatacatctacgatgctgttatctgtaatcgatgatgaagatgagagatatcgtggt
tgtgagccactgcgtttatcatgcccaagctgttctggtaccttcgactgccctcctgta
tctagtctgattactagtgctacaagtgtatcagatccaaatgaaggaaaggatgctact
gctaatttctggcgccatatgcggtgcccaagatgcccagataatgctgacgagtccaaa
atttctcctccaatgcttgccaaccagatgaaaagacaggctgataatttcattagtcta
tattataaaggtttgcagatgtgtgacgatgagggttgcaaatactcgactcacagcgta
aaccttagagttatgggggattccgagagaggaaccatctgccctaactacccacgctgc
aacggtcgcctagtaagacagtacacggaggcagatctatacaagcaactttcatacttt
tgctatgtacttgatgcaacccggtgtcttgaaaagctggaccagaaggcaaggctcccc
ttcgagagagagtttgtagcagtaggccaaacaattaacttggcactgctagagatccag
aaaatccgagatagatgcgcatttggatgggttcagctaagggaccttgccgtgtcaata
tga
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integrated database retrieval system
