Miscanthus floridulus: 136451039
Help
Entry
136451039 CDS
T10264
Name
(RefSeq) protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1-like isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136451039
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
136451039
Surveillance factors
Other surveillance factors
136451039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
136451039
NCBI-ProteinID:
XP_066307869
LinkDB
All DBs
Position
5:complement(143808358..143815194)
Genome browser
AA seq
1527 aa
AA seq
DB search
MAERKLDRPSALGKGGLSLGIEEDRAAAAAMGFVDDSKDQQHLDNSIPLSPQWLYAKPAD
GKISLPHGSSLEPAEKEVRMVEGTVDRKERRRNVFDADSGLRWLEEERETSLLGRRERKK
DVDRDVDNRKTDRRSDNVSARDNTDPRAAPASERWNEGRRDGKWSSRWGPDDKEKDTRSD
KKVDAEKDETHADKQTFTGRLLSESDSRDKWRPRHRQESHSVGTATYRAAPGFGSEKGRV
KDSDIGFAAGRGRGNPNSVASFNRPSSAGSIGAPSVHGKSAKAAVSFRYPRGKLLDIYRQ
KNMMSSFDDADMKLEEIPSITLSTAAKPLAFVAPDKVEEALLEDIRKGKVISSEGINGTG
NKKERAKDLEGPASGIDDDKDKVSFAIAGLGQEVSSDLISEKDAFYVEGTLPTGISTSPP
KKSLEENASSNQYGITDIREGLKTDEIKSSADHDLGTKLPDDSNTLFDVPSFEHPSEPPM
QYQSSDMDIKVGGHANCPEELTLYYLDPQGGVQGPFLGADIISWYEDGYFGLELPVRLSQ
APDDVPFRPLVEVMPHLGQKPQSHIPQPCDGSAEPLESSQSKFQSTVPTASSGKSDQVSN
WNSESNAVDPKRGDHEASVPSRSGWLSSPETGKDIANTSNRQQHIPESVNQDAEEVLYTG
RPNSSMDQSLRDLENDRADFQVAPHDPHSVVGEANLPQHDIPSESDLSPLGLLWSELEGH
PKQPLSSNVLGVNERRNPKPTTPKDIPPVNMRHGPLSRMNEVSSVRDEWPANFGRLDNMN
DANISGRIPQVEAEHHLNFEGQILLQQIRREQQQMQQEQLMARNHLEFSGAFPGQVFDSL
HQHRQPMNQPLSDVEHLLRVQFEIEQQQQRRQLQQEQHQRQLQQQRQAQLLQQQQQQQQQ
QQQMILEQLLQQQLQGSNFGPTNMVDQVLLREHVLNELHQQPHHLQRQHDAAIEQLIQAK
FGHGLHREHHNDMLDVLSRPNQRQMLPLEQQILLGLQHEQQLQSQQLANALRQHSGREEE
RHLSGVWPMDDPAQFIRSGTSPNQRHGRFDLLENLQRSSSFDHHEHLDRSLSLHEHLHRG
GQGIHSLERSGSLPGGGPGPNADVINALAHHHGLGQLETHGDIYPLGQIPMLPSGVHPQQ
HRLQEQLPGSHMGRLERHWSDANGQLQNSLMESSRINQLQIEAEKQRRNVEMNLAVDNPH
AWAALMNKERNAEQDLSDMIHKKLVLQSQQSLGFPDVPVPASFGRKDHFAQPVAENPLRS
VDIMSFEESLAERSLYAKSGQLAQEGSANLGSIPNSIENTGKFNLRSGSGSMLEQKHFLG
IDDVQRDFSDTTGGRTSANQLVGSVNELTRGKKQGSSASLAGDDNDFAEEAVSKWSDSGT
SKGSPHSLLKRSTNQHTTSQPVPTDLSSAIRLKKAGLASSDENKVESGVASVAQGMEGSV
PSNKEAGLYSMPSATNNPDASGQSFSEALKSSRKPPLQYDASESADGGPGGKGAKKKAKK
GKQIDPSLLGFKVHSNRIMMGEIVRDD
NT seq
4584 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaggaagctggatcgaccctcggcgctcggcaaaggtgggctgtcgcttggg
atcgaggaggacagggccgccgccgccgccatggggttcgtcgacgactccaaagatcag
cagcacctggataacagcattcccctgtctcctcagtggctctacgccaaacctgctgat
ggaaagatctcactgcctcatgggtcctcccttgaacctgctgaaaaggaagtgaggatg
gtggaaggaactgttgataggaaagaacgaaggaggaatgtgttcgatgctgatagtggt
cttcgctggcttgaagaggagagggagacgagcctgcttgggaggagggagcgcaagaag
gatgtggaccgggacgtcgataatcgcaagaccgatcgccgttctgacaatgtttctgca
agggacaacactgatccgcgtgcagctcctgcatctgaaaggtggaatgagggccgccgt
gatggaaaatggtcatcaagatggggacctgatgacaaggagaaggacaccaggtcagac
aagaaggttgatgcagagaaggacgaaacccatgctgataaacagacattcactggaagg
ctgctgtctgagtcagattcccgtgataaatggaggcctcgtcaccggcaggaaagtcat
tctgtcggaacagcaacgtaccgtgctgctccaggctttggatctgagaaagggcgtgtt
aaggactcagatattggttttgctgctggaagaggcaggggaaacccaaactcagttgca
tccttcaaccggccatcatctgcaggatcaatcggtgctccatctgtgcatgggaagtct
gcaaaagctgctgttagtttccgctacccaagagggaagcttcttgatatatacaggcag
aaaaatatgatgtcatcctttgatgatgctgacatgaaactggaggaaattccttccatc
acactctctactgctgcaaaacccctagcctttgttgcaccggataaagttgaagaggct
ctcctggaagatattagaaagggtaaagtcattagtagtgaaggaatcaatgggactgga
aacaaaaaagagagggcaaaagatctcgaaggaccagcttctggtattgatgatgacaag
gacaaagtcagttttgcaattgctgggttgggtcaagaagtgtcttcagatttaatttca
gagaaggacgccttctatgttgaagggacacttcctactggcatcagtacatctccgcca
aagaaaagtctggaggaaaatgccagcagcaatcaatatgggattaccgacattagggaa
ggtttgaaaactgatgaaatcaagtcaagtgctgatcatgatcttggcactaagctacct
gatgattcaaacactctgtttgatgtaccatcctttgagcatccttcagaaccccctatg
caataccaaagcagtgacatggatataaaagtgggtggccatgctaattgtccagaagag
ttgacattatattatctggatccccaaggaggtgtgcagggtccatttctgggtgctgac
ataatttcctggtatgaagatggatactttggtttggagttacctgtacgtttgtctcag
gctccagatgatgttcctttccgcccacttgttgaagtcatgccccaccttgggcaaaaa
ccacaatcacatatacctcaaccctgcgatggaagcgctgaacctctggaatcatctcaa
agtaaatttcaatccacagttcctactgcttcctctgggaagagtgaccaagtgtctaat
tggaattctgaaagcaatgctgttgatcctaaaagaggtgatcatgaagcatcagtacct
tctcgtagtggttggttatcttcaccggaaacgggaaaggatatagcaaatactagtaat
cgccagcagcacattcctgaatcagtgaatcaggatgctgaagaagtattgtacactggg
aggcctaatagcagcatggatcaatccctacgggacctcgagaatgaccgtgcagatttc
caggtggcaccacatgatcctcattctgtggttggagaagctaatttgccgcagcatgat
atcccaagtgagagtgatctgagtcctcttggcttactttggtctgagctggaagggcat
ccaaaacaacctctctcatcaaatgtacttggtgtaaatgagcggagaaatcccaagcct
acaacacccaaggacattccacctgtaaacatgagacacgggccacttagcaggatgaat
gaagtttctagtgtgcgtgatgagtggcctgcaaactttggacggctggacaatatgaat
gatgcaaacatttccggcagaatccctcaggttgaagctgagcatcatttgaattttgag
gggcaaatactgcttcaacagatcagacgggagcaacagcaaatgcagcaggagcaattg
atggcccgcaaccatttggagttttctggtgcatttcccgggcaggtgtttgattctttg
caccaacaccgccagcctatgaatcaaccgctttctgatgtggagcatcttttgagagtc
cagtttgaaattgagcaacagcagcaacgccgccagctccaacaagagcagcaccaacgg
cagctacagcagcaacggcaagcccagctcttgcagcaacaacaacagcagcagcagcag
cagcaacagatgatcctcgagcaactgttgcagcagcagctgcagggttcaaattttgga
ccaacaaatatggttgatcaagtcttacttcgtgaacatgtattaaatgaacttcaccag
caacctcaccatttgcaaaggcagcatgatgcggctattgaacaactcattcaagcaaaa
tttggtcatggccttcatagggagcatcataatgatatgttggatgttctctcacgtcca
aatcagagacagatgcttcctttagagcagcaaattcttttaggccttcagcacgagcag
caacttcagtctcaacaattggcaaatgctctgcggcaacattcaggcagggaggaagaa
aggcacttaagtggggtctggccaatggacgatcctgcccagtttatccgctcagggacc
agtccaaatcagagacatggtcgcttcgatctcctggagaaccttcagagatcgtcatcg
tttgatcatcatgaacatcttgaccgcagcttatccttacatgaacatttgcatagggga
ggtcaaggtattcactccctagagcggtctggttctttgcctggtggtggtcctggacca
aacgcagatgtcataaacgccctagcacaccatcatggacttggtcagttggaaacacat
ggtgatatataccctttaggccaaattcctatgcttccttcaggggttcatccccagcaa
cataggcttcaggaacagcttcctggttctcacatgggaaggcttgaaaggcactggtcg
gatgccaatggacagttgcaaaacagtctaatggagtcttcacgcatcaaccagttgcag
attgaagcggagaagcagaggaggaatgtggaaatgaaccttgctgttgacaacccacat
gcatgggcagcccttatgaacaaagagaggaatgcagaacaagatttgagtgacatgatt
cataagaaacttgtccttcaatcgcagcagtccctgggtttccctgatgttcctgttcca
gcatcatttgggcgtaaggatcactttgcgcaacctgttgcggagaaccctctgagatca
gtggacatcatgtcgtttgaggagtctcttgcagaaaggtcactttatgcaaagtcaggg
cagttggcgcaagagggatcagccaatctgggttctatacccaacagtattgagaacact
ggaaaatttaaccttagatcaggatctggatcgatgcttgagcagaagcattttcttgga
attgacgatgtacaaagggacttctcagacaccacaggtggtaggacatcagctaatcaa
ttggttgggagtgtcaatgagttaacgaggggtaaaaagcagggttctagtgcgagcttg
gctggggatgataatgattttgctgaagaagctgttagtaaatggtctgattctggcacg
tcaaaaggaagccctcactccttactaaagcgctctacaaaccaacatactacatctcag
ccagttcccacagatctgtcttcagcaatcaggctgaagaaagcaggccttgcgtcctct
gatgagaataaggtggaatcaggagtcgcatcagtagcccagggtatggaaggcagtgta
cctagcaacaaagaggcagggctgtatagcatgccatcagccaccaacaatccagatgcc
tctggtcagtccttcagcgaagcgctgaagagctcgaggaagcctccgttgcagtatgat
gcctctgaatctgcagatggtggcccaggtggcaagggcgcaaagaagaaagcgaagaaa
gggaagcagattgacccttctcttcttggctttaaggtccacagtaaccgtatcatgatg
ggcgagattgttcgagatgattag
DBGET
integrated database retrieval system
