Miscanthus floridulus: 136451166
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Entry
136451166 CDS
T10264
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein MSH7-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
mflo Miscanthus floridulus
Pathway
mflo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
136451166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mflo03400
]
136451166
DNA repair and recombination proteins [BR:
mflo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
136451166
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GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
AAA_29
Motif
Other DBs
NCBI-GeneID:
136451166
NCBI-ProteinID:
XP_066308021
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Position
5:10413099..10423474
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AA seq
880 aa
AA seq
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MVSADDDIVWSLIGNDDLIAVGLAPEDDDDTGEDAAALFGIDVSSSSAAPTPIDLDGDGG
EGATMTGNPLGSNSNNSAPSVAGNSNGVFYELYELDAEIGQKELDWKIIVSGVGKCRQVG
ISESGIDDAVDKLVARGYKVGRIEQMESANQAKARGLHSVIERKLVHVSTPSIAADNIGT
DAVHLLALKEVTLACNSSQVYGFAFLDYAALKIWVGSVQDDDSSAALGALLMQVSPRELI
YETSGISKETQRTIRKYVSAGSVKMQLTPLSGIDFSDASQIRMLIHSKGFFNASTESWLS
ALDCAVNRDVVICALGGLIGHLTRLMLHDALKNGEVLPYHVYKTCLRMDGQTLVNLEIFI
NNFNGGSSSTLYKHLNHCVTASGKRLLRRWICHPLKDIDAINKRLDVVEGFIQNCGLGPT
ALGYLRKIPDLERLLGQVRSTVGLSSLLQLPFIGEKILKRRIKTFTMLINGLRNGIDLXD
LQRADHGVLALYKVVEIPSLSCLCELIHTFEERIRNEFPCGQDSDVDDNGANNLARLVEF
FIGKTSEWSLVINAVSTIDVLRSFSAMTLSSFGAMFRPQVLLKDDVPILRMKGLWHLYAF
AENANGLVPNDLTLGQDLSGLNRFALLLTGPNMGGKSTIMRATCLAVVLAQLGCYVPCTS
CELTLADSIFTHLGATDRIMSGESTFLVECTETASVLQNATVDSLVLLDELGRGTSTFDG
YAIAYAVFRHLLERVRCRQLFATHYHSLTKEFASHPHVSLQYMACMFKPSSNGNGQKELT
FLYRLTSGACPESYGLQVATMAGIPKSIVEKVSVAGRVMRSKIAGNFKSSEQRAEFSTLH
EEWLREALSVSVMDGLLDDNIMDTLVCIRQELKAHFRKAR
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctgctgatgatgatatcgtctggtcgctcatcggcaacgacgacttgatcgcg
gtaggcctggcccctgaggacgacgacgacaccggagaggacgctgctgcgttgttcggt
attgatgtcagtagcagctctgctgctccgactccgatcgatctggacggcgacggtggt
gaaggggcgacgatgactgggaacccattaggctccaactccaacaactctgctccatct
gttgctggtaactctaatggcgtattttatgagctctatgagctagatgctgagattggc
caaaaagaacttgactggaaaataattgttagtggggtgggcaagtgccgacaggttggc
atttcagaaagtggtatagatgatgctgttgataagcttgtagctagggggtataaagtt
ggacgaatagaacaaatggaatctgcaaaccaggccaaagctagaggattacattctgtt
attgaaagaaagttggttcatgtgtccacaccatcaattgcggctgataacattggtact
gatgctgttcaccttctggcattgaaagaggttaccctagcttgtaacagttcccaggtc
tatggatttgctttcctagactatgctgcccttaaaatttgggtgggttcagtccaagat
gatgactcgtctgcagctttgggtgctttgttgatgcaggtttctcctagagaattaatc
tatgaaacctcaggcatctcaaaagaaactcaaaggacaataagaaaatacgtctcagca
ggatctgtgaagatgcagttgacccccctctctgggatagatttctctgatgcttcacaa
attcgaatgttaatacattctaaagggttctttaacgcatcaacagagtcatggttatct
gctttggactgtgcagtgaatcgagatgtagttatttgtgcacttggtggacttattggc
catttgactaggctcatgttacatgatgccctgaaaaatggggaagtcttaccataccat
gtgtacaaaacatgtttaaggatggatggccagactcttgtgaaccttgagattttcatc
aacaatttcaatggcggttcatctagtactttatataagcaccttaatcactgtgtcaca
gcatctggtaagcggctgctaagaaggtggatttgtcatccacttaaagacattgatgct
atcaataaaaggcttgatgttgttgagggttttatccaaaactgtggactaggccctaca
gcacttgggtatctccggaaaattcctgatcttgagagattattaggacaagttagatcc
actgttgggttatcatctttgcttcaactgccctttattggagaaaagatactaaagaga
cggattaaaacatttacaatgcttatcaatggcctccgcaatggtattgacttangtgac
ttacaaagagcggatcatggtgtcttggcactttataaggttgtggagattccatcattg
agctgcctttgtgagttaatccatacgtttgaagagagaatacgaaatgaatttccatgt
ggccaggattctgatgtcgatgacaatggtgccaacaatttggctcgtctggtggaattt
tttattggaaaaacttctgaatggtctttggtgatcaatgctgtcagcactattgatgtg
cttaggtccttttctgcaatgacattgtcatcatttggtgccatgttcagaccacaagtt
ttgctgaaagatgatgtgcctatacttcggatgaagggtctgtggcatctttatgctttt
gcggaaaatgcaaatggcctggtaccaaatgatttaacccttggtcaggatttatctggt
ctcaatcgttttgcattgttgttaactggtccaaatatgggtgggaaatccacaatcatg
cgtgccacctgcctggctgttgtacttgcccagcttggctgttatgtcccctgcacatca
tgtgagttgacccttgcagattccatctttacgcaccttggtgcaactgatcggattatg
tctggggaaagtacgtttctcgttgaatgtactgagactgcctctgttcttcagaacgca
actgtggactcacttgtcttgcttgatgagcttggaagaggaactagcacatttgatgga
tatgcaatcgcatatgcggtgttccgccacctattggagcgtgtgagatgccgtcagctc
tttgccactcactaccattctctgacaaaggagttcgcctcgcaccctcacgtgagcctc
cagtatatggcctgcatgttcaagccaagcagcaacggcaacggccagaaggagctgacc
ttcctataccggctgacctcaggggcctgtccagagagctacggcctgcaggtcgccaca
atggctggaatcccgaagtcgatagtggagaaggtgtccgtcgcaggccgggtgatgagg
tctaagatcgccgggaacttcaagtcgagcgaacagcgagctgagttctcgaccctccac
gaggaatggctgagggaggccctgtcggtcagcgtgatggacggactcctggatgacaac
atcatggacacgctggtctgcatccggcaggagctgaaggctcacttcaggaaagcgaga
tga
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