Miscanthus floridulus: 136451304
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Entry
136451304 CDS
T10264
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
mflo Miscanthus floridulus
Pathway
mflo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
136451304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136451304
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136451304
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
136451304
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
zf-Di19
Motif
Other DBs
NCBI-GeneID:
136451304
NCBI-ProteinID:
XP_066308107
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All DBs
Position
5:complement(1670473..1673161)
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AA seq
292 aa
AA seq
DB search
MDVDCVSLPDAAARPWPKAAANGGVHELLECPVCTNSMFPPIHQCQNGHTLCSTCKARVH
NRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCPEIFPYYSKIKHEAQCSLRPYNCP
YAGSECAAAGDIPYLVSHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQ
YFCLHFEAFQLGMAPVYMAFLRFMGDENEAKNYSYSLEVGANGRKMVWEGTPRSVRDSHR
KVRDSHDGLIIQRNMALFFSGGDRKELKLRITGRIWKEQQTPDGACIPNLCS
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgactgcgtctcgctgcccgacgcagccgcccggccctggcccaaggccgcc
gccaacggcggcgtccacgagctgctcgagtgccccgtctgcaccaactccatgttcccg
ccgatccaccagtgccaaaatggacatacgttgtgttccacatgcaaggctagagtgcac
aaccgttgccctacctgtagacaagagcttggagatatcaggtgtttggcactggagaaa
gtagcggagtcgcttgagcttccctgcaagtactactctttggggtgcccagaaatcttc
ccatactacagcaagataaaacacgaagcgcaatgcagcttaagaccatacaattgcccc
tatgctggctctgaatgtgccgcagctggtgacatcccttatctcgtttcccatttgagg
gatgatcacaaagttgatatgcatagcggctgcacattcaaccacagatatgtcaaatcg
aacccacgagaagttgaaaacgccacctggatgctaacggtgtttcactgcttcgggcag
tacttctgcctacactttgaggcgttccagcttgggatggcacctgtatacatggccttc
ctccgtttcatgggggacgagaacgaggcgaagaactacagctacagcctcgaggtcggc
gccaacgggaggaagatggtctgggagggcacccccaggagcgtccgcgacagccaccgg
aaggtgcgggacagccacgacggtctcatcatccagaggaacatggcgctgttcttctcc
ggtggcgaccggaaggagctaaagctcaggatcactggccggatctggaaagagcagcag
accccagatggcgcctgtattcccaatctgtgtagctaa
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