KEGG   Miscanthus floridulus: 136451908
Entry
136451908         CDS       T10264                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27 homolog
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
mflo  Miscanthus floridulus
Pathway
mflo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    136451908
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mflo03041]
    136451908
   03400 DNA repair and recombination proteins [BR:mflo03400]
    136451908
Spliceosome [BR:mflo03041]
 Complex B
  Other components
   Prp19 complex
    136451908
 Complex C
   Prp19-CDC5 complex
    136451908
DNA repair and recombination proteins [BR:mflo03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    136451908
SSDB
Motif
Pfam: BCAS2 THOC7 Arc_MA DUF5930
Other DBs
NCBI-GeneID: 136451908
NCBI-ProteinID: XP_066308685
LinkDB
Position
5:32147500..32151318
AA seq 254 aa
MASSATREVLMLEAPPPSDPSAGPWRAAPDAEAVDALPYIDGDYGDAAVKREVDRLVEEE
MRRGKRKPADFLRDLPPVPTAGFENHPMLAKEYERVRAGKPPFMLDMSRYGLEPPPMNKR
NDVGAWRQALRNAQSQLQHQIIRIENLELMLKYGVDVWKLQNKQMESVLSRMQKMAVEYN
ERIENVNRERKFHQQNTGGQLHALTIEWQELCQKNIAIQAACVDLQNQIDQLKLEAKELG
MPMDDNNGTNSQAS
NT seq 765 nt   +upstreamnt  +downstreamnt
atggcctcgtcggcgacgagagaggtgctcatgcttgaggccccgccgccgtctgacccc
tcggcggggccgtggcgcgcggcgccggacgcggaggccgtcgacgcgctgccctacatc
gacggagactacggcgacgcggcggtgaagcgggaggtcgaccgcctcgtcgaggaggag
atgcgccgagggaagcgcaagcccgcagacttcctccgggacctgccccctgttcccacc
gccggattcgagaatcatcctatgcttgctaaagaatatgaacgagttagggctggcaaa
cctccttttatgctagatatgtctcgctatggtttggagccacctccaatgaacaagagg
aatgatgttggtgcctggaggcaggctctacggaatgctcagagccaattgcagcatcaa
attataaggatagagaatctcgagcttatgctgaaatatggtgtggatgtttggaagctc
cagaacaaacaaatggaatctgttctgtctaggatgcaaaagatggctgtagaatacaat
gaaaggatagaaaatgtcaatcgtgagaggaagttccaccagcaaaatactggaggacag
ctgcatgccctgacaattgaatggcaggagctgtgtcaaaaaaatatagctattcaagct
gcctgtgttgacctgcagaatcagattgatcagcttaaacttgaagcaaaagaactggga
atgcccatggacgacaacaatggaaccaactcacaagcatcatga

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