KEGG   Miscanthus floridulus: 136452116
Entry
136452116         CDS       T10264                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
mflo  Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mflo03041]
    136452116
Spliceosome [BR:mflo03041]
 Complex B
  Other components
   Complex B specific factors
    136452116
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st WDR55 Beta-prop_WDR3_2nd EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd LisH_TPL Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_Aladin NBCH_WD40 WDR90_beta-prop_4th Beta-prop_VPS8 Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_NWD2_C Beta-prop_WDR41 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_Nup120_160 Beta-prop_ACSF4 Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Beta-prop_EIPR1 Ge1_WD40 Beta-prop_SCAP Beta-prop_WDR35_TULP_N DUF7165 Beta-prop_Vps41 WD40_RFWD3 Beta-prop_WDR19_1st VPS8_N Beta-prop_HPS5 WD_LRWD1 Beta-prop_IP5PC_F Beta-prop_IFT122_2nd zf_topless
Other DBs
NCBI-GeneID: 136452116
NCBI-ProteinID: XP_066308855
LinkDB
Position
5:complement(46518429..46523939)
AA seq 517 aa
MASSTSTLEIEARDVVKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIDTFIADINAGR
WDAVLPQVAQLKLPRKKLEDLYEQIVLEMAELRELDTARAILRQTQVMGVMKQEQPERYL
RLEHLLVRTYFDPNEAYQESTKENRRALIAQAVASEVSVVPPSRLMALIGQALKWQQHQG
LLPPGTQFDLFRGTAAMKQDEEETYPTSLSHQIKFGKKTHPECARFSPDGQYLVSCSVDG
IIEVWDYLSGKLKKDLQYQADESFMMHEEPVLCVDFSRDSEMLASGAQDGMIKVWRIRTG
QCLRRLERAHSKGVTSVTFSRDGTQILSTSFDTTARVHGLKSGKMLKEFRGHTSYVNYAI
FTTDGSRVITASSDCTVKVWDTKTTDCLHTFKPPPPLRGGDASVNSVHLFPKNTDHIVVC
NKTSSIFIMTLQGQVVKSFSSGKREGGDFVAASVSPKGEWIYCVGEDMNMYCFSYQSGKL
EHLMKVHEKDVIGITHHPHRNLVATIAEDCMMKIWKP
NT seq 1554 nt   +upstreamnt  +downstreamnt
atggcgtcgtcgacgtcgaccctcgaaatcgaggcccgagacgtggttaagatagtgctg
cagttctgcaaggagaactcgctgcagcagacgttccagacgctgcagaacgagtgccag
gtctccctcaacactgtcgacagcatcgacaccttcatcgccgacatcaatgccgggcgc
tgggatgctgtgcttccccaggtcgcgcagctcaagctgccacgcaagaagctcgaggac
ctctacgagcagattgtgttggagatggccgagctccgtgagcttgacacggcccgtgcc
atcctccgccagacgcaggtcatgggtgtcatgaagcaggagcagcctgagcggtacctc
cgtcttgagcacctccttgtccgcacatacttcgaccccaatgaggcctaccaagaatcc
accaaggagaaccggcgagcactgattgctcaagctgttgcttctgaagtatcagtagta
ccgccatctcgtcttatggcactgattggccaggctttgaagtggcaacaacaccaagga
ttgttgcctcctggcacacagtttgatttatttagaggaactgctgcaatgaagcaagat
gaagaagagacataccctacttccttatctcatcaaataaagtttgggaagaaaactcat
cctgaatgtgctcgattttcacctgatggtcagtaccttgtttcatgctcagtggatgga
ataattgaagtctgggattatcttagtggaaagcttaaaaaggatctccaataccaagct
gatgaaagctttatgatgcacgaagaacctgtgctgtgtgttgattttagtagggattct
gaaatgctggcatctggagcacaggatggaatgattaaggtttggcgtatacgaactggt
cagtgcttgcggcgccttgagcgtgcacattcgaaaggtgttacaagtgttacattttca
cgtgatggaacccaaatattgagtacatcctttgacactaccgcgagggtacatggtctc
aagtctggaaagatgctgaaagaatttcgaggtcatacttcctatgtgaattatgccatc
ttcactactgacggtagccgtgtcattacagcttctagtgattgtactgttaaggtctgg
gatactaaaacaacagattgcttgcatactttcaagccaccacctcctttgaggggagga
gatgcatctgttaattccgtccatttatttccaaaaaatactgatcacattgttgtctgc
aataagacttcatcgatattcatcatgactttacaaggacaggttgtaaagagtttctca
tcaggtaagcgagaagggggagattttgttgcagcttcagtttccccaaaaggagaatgg
atatattgtgttggtgaagacatgaacatgtattgctttagctaccaatctggtaaactg
gagcatctgatgaaggtccatgagaaggacgtcataggcattacgcaccatcctcacagg
aacttggtagccaccattgctgaggattgtatgatgaagatatggaagccttga

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