Miscanthus floridulus: 136452819
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Entry
136452819 CDS
T10264
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
mflo Miscanthus floridulus
Pathway
mflo03082
ATP-dependent chromatin remodeling
mflo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
136452819
03083 Polycomb repressive complex
136452819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mflo03036
]
136452819
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
136452819
Histone modification proteins
HAT complexes
HATB complex
136452819
HDAC complexes
Sin3A-HDAC complex
136452819
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
136452819
PRC2.2
136452819
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
136452819
Heterochromatin formation proteins
Other heterochromatin formation proteins
136452819
Chromatin remodeling factors
NuRD complex
136452819
NuRF complex
136452819
NuRF complex (fruit fly)
136452819
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_CDC20-Fz
CAF1C_H4-bd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40_Gbeta
Beta-prop_EML
EIF3I
WDR55
Beta-prop_WDR36-Utp21_1st
DSE1_N
DNAI3_WD
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
CFAP251_N
eIF2A
Beta-prop_IFT140_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
136452819
NCBI-ProteinID:
XP_066309506
LinkDB
All DBs
Position
5:complement(102639066..102644471)
Genome browser
AA seq
453 aa
AA seq
DB search
MKERSGSRAAVDERYAQWKSVIPVLYDWFANHNLVWPSLSCRWGPQFEKATYKNRQRLYL
SEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIVHPGEVNRIREL
PQNSKIIATHTDSPDVLIWDVEAQPNRHAVLGASESRPDLILTGHKENAEFALAMCPAEP
YVLSGGKDKSVVLWSIQDHISALGDSSSSPGGSGSKQSGKTATEKESPKVDPRGIFHGHD
STVEDVQFCPSSAQEFCSVGDDACLILWDARTGTGPAVKVEKAHSGDVHCVDWNPLDVNY
ILTGSADNSVRMWDRRNLGSGGAGAPIHKFEGHKAAVLCVQWSPDRASVFGSSAEDGFLN
VWDHEKVGKKKNSNVPSGLFFQHAGHRDKIVDFHWNSSDPWTIVSVSDDGESTGGGGTLQ
IWRMSDLIYRPEDEVLTELENFKAHLASCAPRN
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagagaagcggctccagggcggcggtggacgagcgctacgcgcagtggaagtcg
gtcatccccgttctctacgactggtttgccaaccacaacctcgtctggccatccctctcc
tgccggtgggggccacagtttgagaaagctacctacaagaatcgtcaacgcctttactta
tctgagcagacggatgggagtgtgcctaatactctggttatcgcaaactgtgaagttgtg
aaaccaagggttgcagcagctgaacatatctcgcagtttaacgaggaagcacgatcacct
tttgttaagaagtacaagaccatagttcatcctggtgaagttaacagaatcagggagctt
ccacagaacagtaagatcatagccactcacactgacagtccagatgtacttatttgggat
gttgaagcacagccaaatagacatgccgtcctgggagcttccgaatctcgccctgatctg
atattaacgggacataaggaaaatgcggaatttgcgcttgccatgtgtccagccgaacca
tatgtcctatcaggaggaaaggacaaatctgttgtcttgtggagcatccaagaccacata
tctgcccttggggattcctcgtcttctcctggaggatctggcagcaagcagtctggtaaa
actgcaactgaaaaagagagtcctaaagttgatcctagaggtatattccacggacatgac
agcactgttgaagatgttcagttctgcccttccagtgcgcaggagttttgtagtgtgggt
gatgatgcttgtcttattctgtgggatgctcgaactggcactggcccagctgttaaggtt
gagaaagctcacagtggagatgttcactgtgttgattggaatccccttgacgttaactat
atcttaactggttctgccgataactctgtccgaatgtgggatcgtcgcaatctgggttcg
ggaggagctggtgctccaattcacaaatttgagggccataaagctgctgttctttgtgtt
cagtggtcacctgacagagcatctgtttttggaagttctgcggaagatggtttcttaaac
gtgtgggaccatgagaaggttgggaagaagaaaaattctaatgtcccatctgggcttttc
tttcagcatgctggtcatagggataagatcgtagacttccactggaattcgtcagatcct
tggacaattgtcagtgtctctgatgatggtgagagcactggtggaggtggaacactgcag
atatggcgcatgagtgatttgatctaccgccctgaggatgaagttcttacagaactggag
aatttcaaggctcacttggccagctgtgctccgagaaattga
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