Miscanthus floridulus: 136453117
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Entry
136453117 CDS
T10264
Name
(RefSeq) vacuolar protein sorting-associated protein 36-like
KO
K12190
ESCRT-II complex subunit VPS36
Organism
mflo Miscanthus floridulus
Pathway
mflo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
136453117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mflo04131
]
136453117
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mflo04147
]
136453117
Membrane trafficking [BR:
mflo04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
136453117
Exosome [BR:
mflo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
136453117
Exosomal proteins of colorectal cancer cells
136453117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Flagellin_N
Motif
Other DBs
NCBI-GeneID:
136453117
NCBI-ProteinID:
XP_066309787
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All DBs
Position
5:113794454..113799050
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AA seq
446 aa
AA seq
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MSAAAAAADWLPSASVTASGRPVLSAGEVERNLLPLVDLEPEENPRLAPLRTCLLALTSH
RLIFLHEPSRSARGLPLAAVVHAYPPHRRHSHNPLRSLFSSSSSSSQHPRIRLQISMPPA
RSEVIAIVVTCKADVGVFFGRMLEAIRARAWEVAPAAAPSSGTPVAEGAAPAEDIAIRMP
VVGVSGILRMEQESWESAGQNLQDAFQDLNALMSKAKEMMQLAEKMRLKLLMNSSTESNS
NDEEMGSKQDMQDLLLSVGIVSPVTKETAGALYHQQLSLQLADFVRIPLEKAGGMMALVD
VYCLFNRARGTELISPEDLLQACSLWEKVDVPVMLRKFDSGVKVIQTKTHSDEEVFARIS
SLAQKPDALQKGISPSDAAFTLGIAPALAKEHLLNAENKGLFCRDVSPDGFRFFINLFNE
IDAQNIYSQKPHGLYNAWISVAMASH
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgccgcagccgcagccgactggctcccgtcagcgtccgtgacggcgtccggc
cgcccggtgctttccgcaggcgaggtggagcggaatctcctcccgctcgtggacctcgag
cccgaggagaacccgcgcctcgcgcccctccgcacctgcctcctcgcgctcacttcccac
cgcctcatcttcctccacgagccgtcccgctccgcgcgcggcctcccgctcgccgccgtc
gtccatgcctaccctccccaccgcaggcacagccacaaccccctccgctccctcttctcc
tcctcgtcttcctcgtcgcagcatccccgcatccgcctccagatctccatgccacccgcg
cggtcggaggtcatcgccatcgtcgtgacctgtaaggctgacgttggtgtgttcttcggg
aggatgctcgaggcgatccgtgcaagggcttgggaggtggcccccgcagctgctccgtcg
agcggcacgccggtggcggagggggccgcgcctgcggaggacatcgcgatccggatgccc
gttgttggggtctcggggatactgcggatggagcaggagtcatgggagagcgccgggcag
aacttgcaagatgcgttccaggatctcaatgccctcatgagcaaagctaaggaaatgatg
cagttagcagagaaaatgaggctcaagctattaatgaactcatctactgaatcaaattcc
aatgatgaagagatgggttctaagcaagacatgcaggatttgctattgagtgttggcatt
gtgtctcctgtgacgaaagaaactgctggtgcgttgtatcatcagcagttgtcactacag
ctggcggacttcgtaagaataccgcttgagaaagcaggtggtatgatggcactagttgat
gtttattgtctcttcaaccgtgctaggggaacagagttaatctcaccagaggaccttttg
caagcttgttcgctgtgggagaaagttgatgtcccagtcatgctcaggaaatttgatagt
ggagtgaaggtgatccagaccaagacacatagtgatgaagaggtatttgcaagaatctca
tcacttgcacagaagccggatgctcttcagaaagggattagcccaagtgatgctgcattc
acactgggaattgctccagctttagcgaaggagcatcttctaaatgcagaaaacaaaggc
ctgttctgcagagatgttagtccagatggattccgcttttttatcaatttatttaatgaa
attgatgcccaaaatatttactcgcaaaaaccccatgggctgtacaacgcttggatctcc
gttgcgatggcatctcactga
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