KEGG   Miscanthus floridulus: 136453138
Entry
136453138         CDS       T10264                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A-like
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
mflo  Miscanthus floridulus
Pathway
mflo03020  RNA polymerase
mflo03420  Nucleotide excision repair
Brite
Transcription machinery [BR:mflo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     136453138
  RNA polymerase III system
   RNA polymerase III
     136453138
  RNA polymerase I system
   RNA polymerase I
     136453138
DNA repair and recombination proteins [BR:mflo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      136453138
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Mrr_cat OapB
Other DBs
NCBI-GeneID: 136453138
NCBI-ProteinID: XP_066309810
LinkDB
Position
5:114561652..114564621
AA seq 210 aa
MSAGLVTDEATVGRMYRIRRTVMQMLRDRGYLVVEHELATSRFNFLRKFGESFHREDLQI
NKSKKNDPSDQIYVFFPNDDKVGVKHVKKYVEMMTHENVSRAVLVLQQNLTPFAKSFLIE
LETKIHLEVFQEAELLINIKEHVLVPEHQVLTNEEKKTLLERYTLKETQLPRIQISDPIA
RYYGLRRGQVVKIIRPSETAGRYVTYRYVV
NT seq 633 nt   +upstreamnt  +downstreamnt
atgtcggcggggctggtgaccgacgaggccaccgtggggcggatgtaccggatccggcgc
acggtgatgcagatgctgcgggaccgtggctacctggtggtggagcacgagctcgccacc
agccgcttcaacttcctccgcaagttcggcgagtccttccaccgcgaggacctccaaatc
aacaagtccaagaagaacgacccctccgaccagatatatgttttcttccccaatgatgac
aaggtaggggtgaagcacgtcaagaagtacgttgaaatgatgacgcatgagaatgtctcc
agagctgtgttggttcttcagcagaacctaactccatttgcaaagtcgtttctcatagaa
ttggagacaaagatccatttggaagttttccaggaggccgagttgcttataaacatcaag
gagcatgttcttgttcctgagcatcaggtgctcacaaatgaggagaaaaagacgctattg
gagcggtacaccttaaaggaaactcagcttccaagaatacagatttcggatcctattgct
aggtactatggcctcagacgaggtcaggttgtgaagatcatcagacccagcgagacggct
ggcagatacgttacataccgctatgttgtatga

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